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WormBase Tree Display for Gene: WBGene00040210

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Name Class

WBGene00040210SMapS_parentSequencecb25.fpc4247
IdentityVersion2
NameCGC_nameCbr-pqn-42From_analysisInferred_from_orthology
Sequence_nameCBG21440
Molecular_nameCBG21440
CBG21440.1
CBP30076
Other_nameCBG_21440Accession_evidenceNDBHE601408
Public_nameCbr-pqn-42
DB_infoDatabaseNDBlocus_tagCBG_21440
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-pqn-42
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpqn
Allele (22)
RNASeq_FPKMWBls:00000023.61273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.90294From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.02715From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.06893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.83945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.9333From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.13706From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.434621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.44178From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.44893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.32984From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.40446From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.5845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
16.0428From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
17.5011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
15.563From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
15.8566From_analysisRNASeq.briggsae.WBls:0000004.control_mean
17.8582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.14736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.00455From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.7733From_analysisRNASeq.briggsae.WBls:0000027.control_mean
17.4415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.08628From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.69035From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003512.9871From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.7788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.25375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.39434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.38642From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.70134From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.37849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000411.90693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
19.2737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.36374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.4079From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.45205From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.4991From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.7698From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.96522From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.54077From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.47839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.61828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.02712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.79264From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.86489From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.90176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.98467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.8472From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.18732From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.79945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001014.00455From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.5764From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.50591From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.40977From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Selenoprotein P, N-terminal and Selenoprotein P, N terminal region. Is an ortholog of C. elegans pqn-42.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21440
Corresponding_CDS_historyCBG21440:bp194
Corresponding_transcriptCBG21440.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1067368
Microarray_resultsGPL8303_CB6_WBGene00040210_A
GPL8303_CB6_WBGene00040210_B
GPL14143_CBG21440_1221-1280_0.938_3_A
GPL14143_CBG21440_1329-1388_0.925_8_B
GPL14143_CBG21440_1542-1601_0.933_4_C
MethodGene