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WormBase Tree Display for Gene: WBGene00040259

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Name Class

WBGene00040259SMapS_parentSequencecb25.fpc4250
IdentityVersion2
NameCGC_nameCbr-arl-8From_analysisInferred_from_orthology
Sequence_nameCBG21511
Molecular_nameCBG21511
CBG21511.1
CBP05104
Other_nameCBG_21511Accession_evidenceNDBHE601157
Public_nameCbr-arl-8
DB_infoDatabaseNDBlocus_tagCBG_21511
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-arl-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarl
RNASeq_FPKMWBls:0000002115.828From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
122.489From_analysisRNASeq.briggsae.WBls:0000002.control_mean
169.507From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
82.1312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
134.532From_analysisRNASeq.briggsae.WBls:0000002.control_mean
142.667From_analysisRNASeq.briggsae.WBls:0000002.control_median
170.662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003191.591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
232.036From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
272.481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
249.046From_analysisRNASeq.briggsae.WBls:0000003.control_mean
283.067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004205.935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
217.518From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
229.102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
206.609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
220.908From_analysisRNASeq.briggsae.WBls:0000004.control_mean
224.495From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
238.399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027117.216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
12.9093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
40.1435From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
56.7563From_analysisRNASeq.briggsae.WBls:0000027.control_mean
56.6999From_analysisRNASeq.briggsae.WBls:0000027.control_median
60.8813From_analysisRNASeq.briggsae.WBls:0000027.control_mean
73.2563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003564.6855From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003826.9139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
54.5633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
64.3878From_analysisRNASeq.briggsae.WBls:0000038.control_mean
66.0126From_analysisRNASeq.briggsae.WBls:0000038.control_median
77.4619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
98.6121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041155.967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
196.178From_analysisRNASeq.briggsae.WBls:0000041.control_mean
205.7From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
207.567From_analysisRNASeq.briggsae.WBls:0000041.control_median
209.434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
213.609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
186.847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
199.666From_analysisRNASeq.briggsae.WBls:0000041.control_mean
226.439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063138.447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
60.6782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
62.844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
63.2767From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
74.6752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
79.9842From_analysisRNASeq.briggsae.WBls:0000063.control_mean
105.553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
68.976From_analysisRNASeq.briggsae.WBls:0000063.control_median
84.2457From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101115.01From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
98.6121From_analysisRNASeq.briggsae.total_over_all_stages.control_median
116.522From_analysisRNASeq.briggsae.total_over_all_stages.control_median
132.911From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143726
00143727
Ortholog (29)
Paralog (15)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans arl-8. In C. elegans, arl-8 is involved in axo-dendritic transport; endosome to lysosome transport; and regulation of anterograde synaptic vesicle transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21511
Corresponding_CDS_historyCBG21511:bp194
Corresponding_transcriptCBG21511.1
Other_sequence (59)
Experimental_infoExpr_patternExpr1066165
Microarray_resultsGPL8303_CB6_WBGene00040259_A
GPL8303_CB6_WBGene00040259_B
GPL14143_CBG21511_180-239_0.938_3_B
GPL14143_CBG21511_302-361_0.914_6_A
GPL14143_CBG21511_387-446_0.947_1_C
MethodGene