Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00040999

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00040999SMapS_parentSequencecb25.fpc4334b
IdentityVersion2
NameCGC_nameCbr-sart-1From_analysisInferred_from_orthology
Sequence_nameCBG22442
Molecular_nameCBG22442
CBG22442.1
CBP42466
Other_nameCBG_22442Accession_evidenceNDBHE600946
Cbr-sart-1From_analysisInferred_from_orthology
Public_nameCbr-sart-1
DB_infoDatabaseNDBlocus_tagCBG_22442
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
204 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameCbr-sart-1
328 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-snu-66
Other_nameCbr-sart-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsart
Allele (18)
RNASeq_FPKMWBls:0000002103.765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
49.5097From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
53.474From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.1473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.79From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
40.1498From_analysisRNASeq.briggsae.WBls:0000002.control_median
47.803From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003150.602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
192.551From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
234.499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
153.172From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
179.424From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000463.2372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
66.0678From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
68.8984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
62.4503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
64.7645From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
65.5407From_analysisRNASeq.briggsae.WBls:0000004.control_mean
68.3533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.2515From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.5158From_analysisRNASeq.briggsae.WBls:0000027.control_mean
19.4688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.82707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.8602From_analysisRNASeq.briggsae.WBls:0000027.control_median
21.7933From_analysisRNASeq.briggsae.WBls:0000027.control_mean
49.6257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003548.0733From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.9849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
46.6896From_analysisRNASeq.briggsae.WBls:0000038.control_median
48.9582From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.58651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
77.3943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
95.8672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004145.0212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
64.0699From_analysisRNASeq.briggsae.WBls:0000041.control_mean
67.8456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
69.522From_analysisRNASeq.briggsae.WBls:0000041.control_median
71.1985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
72.2144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
36.6072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
46.9479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
56.6391From_analysisRNASeq.briggsae.WBls:0000041.control_mean
57.3968From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
31.1025From_analysisRNASeq.briggsae.WBls:0000063.control_mean
37.2471From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
38.4052From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
39.7102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
40.15From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
35.8301From_analysisRNASeq.briggsae.WBls:0000063.control_mean
39.0577From_analysisRNASeq.briggsae.WBls:0000063.control_median
59.4682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010140.8979From_analysisRNASeq.briggsae.total_over_all_stages.control_median
52.7984From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
47.5106From_analysisRNASeq.briggsae.total_over_all_stages.control_median
55.3508From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00144315
Ortholog (34)
Structured_descriptionAutomated_descriptionPredicted to be involved in mRNA splicing, via spliceosome. Is an ortholog of C. elegans snu-66.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22442
Corresponding_CDS_historyCBG22442:bp194
CBG22442:bp255
Corresponding_transcriptCBG22442.1
Other_sequence (36)
Experimental_infoExpr_patternExpr1050055
Microarray_resultsGPL8303_CB6_WBGene00040999_A
GPL8303_CB6_WBGene00040999_B
GPL14143_CBG22442_834-893_0.804_103_C
GPL14143_CBG22442_1008-1067_0.806_96_A
GPL14143_CBG22442_1417-1476_0.849_58_B
MethodGene