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WormBase Tree Display for Gene: WBGene00041393

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Name Class

WBGene00041393SMapS_parentSequencecb25.fpc4426b
IdentityVersion2
NameCGC_nameCbr-cdc-73From_analysisInferred_from_orthology
Sequence_nameCBG22949
Molecular_nameCBG22949
CBG22949.1
CBP26304
Other_nameCBG_22949Accession_evidenceNDBHE600964
Public_nameCbr-cdc-73
DB_infoDatabaseNDBlocus_tagCBG_22949
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
210 Mar 2014 11:29:42WBPerson2970Name_changeCGC_nameCbr-cdc-73
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdc
RNASeq_FPKMWBls:000000217.588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
25.0469From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.745From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
29.8078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.7981From_analysisRNASeq.briggsae.WBls:0000002.control_mean
28.7764From_analysisRNASeq.briggsae.WBls:0000002.control_median
32.0518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003103.419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
107.379From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
111.338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
114.557From_analysisRNASeq.briggsae.WBls:0000003.control_mean
128.914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000462.3913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
66.2538From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
70.1163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
64.1067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
69.9324From_analysisRNASeq.briggsae.WBls:0000004.control_mean
70.6482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
82.3994From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.6466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.46211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8.94508From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.72654From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.4775From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.6866From_analysisRNASeq.briggsae.WBls:0000027.control_median
15.0749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003517.7949From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.9661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
15.8722From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.1545From_analysisRNASeq.briggsae.WBls:0000038.control_mean
16.7784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
24.0105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.86304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004128.9826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
39.5009From_analysisRNASeq.briggsae.WBls:0000041.control_mean
40.4637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
42.3242From_analysisRNASeq.briggsae.WBls:0000041.control_median
44.1847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
44.3726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
32.6485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
37.1886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
37.9734From_analysisRNASeq.briggsae.WBls:0000041.control_mean
38.8261From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006322.1532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
26.1657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
26.2158From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
27.3683From_analysisRNASeq.briggsae.WBls:0000063.control_mean
30.1453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
32.1617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
27.0752From_analysisRNASeq.briggsae.WBls:0000063.control_median
27.4627From_analysisRNASeq.briggsae.WBls:0000063.control_mean
27.9346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010124.0105From_analysisRNASeq.briggsae.total_over_all_stages.control_median
31.098From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.8398From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.6529From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00144578
00144579
Ortholog (43)
Structured_descriptionAutomated_descriptionPredicted to be involved in transcription elongation by RNA polymerase II. Predicted to be part of Cdc73/Paf1 complex. Is an ortholog of C. elegans cdc-73.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22949
Corresponding_CDS_historyCBG22949:bp194
Corresponding_transcriptCBG22949.1
Other_sequence (12)
Experimental_infoExpr_patternExpr1054485
Microarray_resultsGPL8303_CB6_WBGene00041393_A
GPL8303_CB6_WBGene00041393_B
GPL14143_CBG22949_151-210_0.853_43_C
GPL14143_CBG22949_369-428_0.880_27_B
GPL14143_CBG22949_1054-1113_0.930_8_A
MethodGene