WormBase Tree Display for Gene: WBGene00041588

WBGene00041588 SMap: S_parent: Sequence: cb25.fpc4470
  Identity: Version: 2
    Name: CGC_name: Cbr-col-157.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG23185
      Molecular_name: CBG23185
        CBG23185.1
        CBP05496
      Other_name: CBG_23185 Accession_evidence: NDB HE601533
      Public_name: Cbr-col-157.1
    DB_info: Database: NDB locus_tag CBG_23185
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:11 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbr-col-157.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 460.997 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        556.941 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        664.803 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        976.472 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        43.2273 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        508.969 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        509.409 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.561647 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        10.0424 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        19.5232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        13.6349 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        20.82 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 17.5677 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        19.5026 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        21.4375 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        17.0097 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        17.8998 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        18.763 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        19.9003 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 (12)
      WBls:0000027 1273.21 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3250.23 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3656.61 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        4820.87 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1898.23 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        2777.42 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2912.23 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 92.6129 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1331.3 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1724.36 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1807.48 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1877.09 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1890.61 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        2562.1 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 107.931 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        193.877 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        28.3783 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        39.5617 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        73.7464 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        92.437 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        25.1579 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        51.933 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        64.3043 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        76.535 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 113.799 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        117.161 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        124.259 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        132.5 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        97.5438 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        115.48 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        47.551 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        89.2117 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 132.5 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        721.764 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        110.865 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        607.507 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00144788
    Ortholog (47)
    Paralog (155)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-157. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG23185
    Corresponding_CDS_history: CBG23185:bp194
    Corresponding_transcript: CBG23185.1
    Other_sequence (305)
  Experimental_info: Microarray_results: GPL8303_CB6_WBGene00041588_B
      GPL8303_CB6_WBGene00041588_E
  Method: Gene