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WormBase Tree Display for Gene: WBGene00041721

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Name Class

WBGene00041721SMapS_parentSequencecb25.fpc4470
IdentityVersion1
NameCGC_nameCbr-cpr-9From_analysisInferred_from_orthology
Sequence_nameCBG23351
Molecular_nameCBG23351
CBG23351.1
CBP12405
Other_nameCBG_23351Accession_evidenceNDBHE601533
Public_nameCBG23351
DB_infoDatabaseNDBlocus_tagCBG_23351
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
228 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-cpr-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpr
AlleleWBVar00000747
WBVar00000748
WBVar00027149
WBVar00027154
RNASeq_FPKMWBls:00000021017.21From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1237.52From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
330.825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
861.852From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1019.31From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1127.36From_analysisRNASeq.briggsae.WBls:0000002.control_median
1491.67From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.136776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.67274From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.2087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.81358From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.09525From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.98591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.41014From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.83436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.995739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.32879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.35415From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.69979From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:0000027167.703From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
196.423From_analysisRNASeq.briggsae.WBls:0000027.control_mean
336.485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
85.0807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
252.094From_analysisRNASeq.briggsae.WBls:0000027.control_median
367.631From_analysisRNASeq.briggsae.WBls:0000027.control_mean
881.254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352898.59From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381231.21From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1250.06From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
235.847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
272.896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
747.503From_analysisRNASeq.briggsae.WBls:0000038.control_mean
752.053From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:0000041497.918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
525.826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
673.638From_analysisRNASeq.briggsae.WBls:0000041.control_median
696.083From_analysisRNASeq.briggsae.WBls:0000041.control_mean
821.449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
939.14From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
528.049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
674.749From_analysisRNASeq.briggsae.WBls:0000041.control_median
715.627From_analysisRNASeq.briggsae.WBls:0000041.control_mean
981.379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
245.708From_analysisRNASeq.briggsae.WBls:0000063.control_mean
289.693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
305.995From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
310.688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
322.166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1856.71From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
308.341From_analysisRNASeq.briggsae.WBls:0000063.control_median
514.209From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101322.166From_analysisRNASeq.briggsae.total_over_all_stages.control_median
641.468From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
326.496From_analysisRNASeq.briggsae.total_over_all_stages.control_median
640.721From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00144958
00144959
Ortholog (35)
Paralog (34)
Structured_descriptionAutomated_descriptionPredicted to enable cysteine-type peptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans cpr-9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23351
Corresponding_CDS_historyCBG23351:bp194
Corresponding_transcriptCBG23351.1
Other_sequence (819)
Experimental_infoExpr_patternExpr1058960
Microarray_resultsGPL8303_CB6_WBGene00041721_A
GPL14143_CBG23351_541-600_0.824_50_A
GPL14143_CBG23351_625-684_0.944_1_B
GPL14143_CBG23351_754-813_0.887_18_C
Expression_clusterWBPaper00051137:Santeuil-virus_downregulated_JU1264
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene