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WormBase Tree Display for Gene: WBGene00041777

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Name Class

WBGene00041777SMapS_parentSequencecb25.fpc4470
IdentityVersion3
NameSequence_nameCBG23416
Molecular_nameCBG23416
CBG23416.1
CBP46195
Other_nameCBG_23416Accession_evidenceNDBHE601533
Public_nameCBG23416
DB_infoDatabaseNDBlocus_tagCBG_23416
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-myo-3
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002107.886From_analysisRNASeq.briggsae.WBls:0000002.control_mean
125.829From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
153.597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
44.231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
48.144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
86.9865From_analysisRNASeq.briggsae.WBls:0000002.control_median
92.9502From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.26693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
13.4566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
7.36176From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
10.7707From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
8.49808From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000483.0857From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
83.1206From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
83.1554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
80.3837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
85.7535From_analysisRNASeq.briggsae.WBls:0000004.control_mean
86.2462From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
95.8967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027131.257From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
142.079From_analysisRNASeq.briggsae.WBls:0000027.control_mean
250.762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
44.2188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
137.061From_analysisRNASeq.briggsae.WBls:0000027.control_median
142.276From_analysisRNASeq.briggsae.WBls:0000027.control_mean
142.866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003595.3016From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038155.513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
65.9259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
66.7603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
73.7111From_analysisRNASeq.briggsae.WBls:0000038.control_median
80.6619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
92.2153From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004121.9832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
53.9154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
54.0606From_analysisRNASeq.briggsae.WBls:0000041.control_mean
58.6669From_analysisRNASeq.briggsae.WBls:0000041.control_median
63.4184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
76.9252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
23.1031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
51.3158From_analysisRNASeq.briggsae.WBls:0000041.control_mean
68.5497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
40.7905From_analysisRNASeq.briggsae.WBls:0000063.control_mean
49.5791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
49.7754From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
50.1459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
54.4519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
31.7608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
39.2855From_analysisRNASeq.briggsae.WBls:0000063.control_mean
49.6772From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010165.9259From_analysisRNASeq.briggsae.total_over_all_stages.control_median
74.9298From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
66.3431From_analysisRNASeq.briggsae.total_over_all_stages.control_median
72.6496From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145039
00145040
00145041
00145042
Ortholog (38)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans unc-54 and members of the C. elegans myo and nmy gene classes including myo-3 and nmy-2. In C. elegans, myo-1 is involved in muscle contraction and pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23416
Corresponding_CDS_historyCBG23416:bp255
Corresponding_transcriptCBG23416.1
Other_sequence (190)
Experimental_infoExpr_patternExpr1066488
Drives_constructWBCnstr00021499
Microarray_resultsGPL8303_CB6_WBGene00041777_A
GPL8303_CB6_WBGene00041777_B
GPL14143_CBG23416_4608-4667_0.861_77_A
GPL14143_CBG23416_5740-5799_0.959_1_B
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_upregulated
WBPaper00051425:CB_L4_vs_embryo_upregulated
Remark[180319 gw3] The CGC name Cbr-myo-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene