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WormBase Tree Display for Gene: WBGene00041936

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Name Class

WBGene00041936SMapS_parentSequencecb25.NA_009
IdentityVersion2
NameCGC_nameCbr-fipp-1From_analysisInferred_from_orthology
Sequence_nameCBG23626
Molecular_nameCBG23626a
CBG23626a.1
CBP12523
CBG23626b
CBP43497
CBG23626b.1
Other_nameCBG_23626Accession_evidenceNDBHE601352
Public_nameCbr-fipp-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
211 Nov 2008 17:09:12WBPerson2970Name_changeCGC_nameCbr-fipp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfipp
RNASeq_FPKMWBls:0000002112.196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.8005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
58.3065From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
62.4343From_analysisRNASeq.briggsae.WBls:0000002.control_mean
55.9746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
57.1405From_analysisRNASeq.briggsae.WBls:0000002.control_median
60.8194From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003160.308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
230.915From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
301.522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
160.626From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
207.485From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000467.0004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
68.3462From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
69.6919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
68.6054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
69.4146From_analysisRNASeq.briggsae.WBls:0000004.control_mean
70.2697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
71.5054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002716.2028From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.89219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
7.95662From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.0172From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.0797From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.5783From_analysisRNASeq.briggsae.WBls:0000027.control_mean
39.2615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003538.8457From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.7333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
18.8454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
34.512From_analysisRNASeq.briggsae.WBls:0000038.control_median
37.7515From_analysisRNASeq.briggsae.WBls:0000038.control_mean
50.1786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
71.2488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041100.321From_analysisRNASeq.briggsae.WBls:0000041.control_mean
108.712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
109.74From_analysisRNASeq.briggsae.WBls:0000041.control_median
110.767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
116.689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
65.1162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
63.5738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
77.7544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
90.4354From_analysisRNASeq.briggsae.WBls:0000041.control_mean
93.2332From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
32.5088From_analysisRNASeq.briggsae.WBls:0000063.control_mean
34.2728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
38.8149From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
43.449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
46.0073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
38.3937From_analysisRNASeq.briggsae.WBls:0000063.control_mean
41.132From_analysisRNASeq.briggsae.WBls:0000063.control_median
67.8181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010139.0066From_analysisRNASeq.briggsae.total_over_all_stages.control_median
58.1219From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
53.0766From_analysisRNASeq.briggsae.total_over_all_stages.control_median
62.1296From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (28)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Pre-mRNA polyadenylation factor Fip1 domain and Fip1 motif. Is an ortholog of C. elegans fipp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23626a
CBG23626b
Corresponding_CDS_historyCBG23626:bp194
Corresponding_transcriptCBG23626a.1
CBG23626b.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1061577
Microarray_resultsGPL8303_CB6_WBGene00041936_A
GPL8303_CB6_WBGene00041936_B
GPL8303_CB6_WBGene00041936_C
GPL14143_CBG23626_460-519_0.854_44_C
GPL14143_CBG23626_502-561_0.877_29_B
GPL14143_CBG23626_717-776_0.879_27_A
MethodGene