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WormBase Tree Display for Gene: WBGene00042500

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Name Class

WBGene00042500SMapS_parentSequencecb25.NA_147
IdentityVersion2
NameCGC_nameCbr-gcy-18From_analysisInferred_from_orthology
Sequence_nameCBG24374
Molecular_nameCBG24374
CBG24374.1
CBP42574
Other_nameCBG_24374Accession_evidenceNDBHE601219
Public_nameCbr-gcy-18
DB_infoDatabaseNDBlocus_tagCBG_24374
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-gcy-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgcy
AlleleWBVar00041979
RNASeq_FPKMWBls:00000020.212108From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.277907From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.280542From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.35161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.289165From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.296472From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.315036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.04171From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.199544From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.357378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.159342From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.186144From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.47577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.61218From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.748591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0.455402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.655685From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.758782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.839881From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.033839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.281925From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.11099From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.01721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.394422From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.506919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.959973From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.566127From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.025982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.162472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.236667From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.310863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.415194From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.16146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.301004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.356019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.36755From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.37908From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.682733From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.69483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.03695From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.07051From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.72251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.96963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.109808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.504342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.630186From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.668902From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.760517From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.10736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.163355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.552381From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.586622From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001010.37908From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.582583From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.418115From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.625941From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145573
00145574
00145575
00145576
Ortholog (37)
Paralog (39)
Structured_descriptionAutomated_descriptionPredicted to enable protein kinase activity. Predicted to be involved in cyclic nucleotide biosynthetic process and intracellular signal transduction. Expressed in AFDL and AFDR. Is an ortholog of C. elegans gcy-18. In C. elegans, gcy-18 is involved in detection of temperature stimulus; thermosensory behavior; and thermotaxis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24374
Corresponding_CDS_historyCBG24374:bp255
Corresponding_transcriptCBG24374.1
Other_sequence (22)
Experimental_infoExpr_patternExpr12205
Expr1062488
Drives_constructWBCnstr00020403
Microarray_resultsGPL8303_CB6_WBGene00042500_A
GPL8303_CB6_WBGene00042500_B
GPL14143_CBG24374_1801-1860_0.832_78_C
GPL14143_CBG24374_2105-2164_0.771_162_B
GPL14143_CBG24374_2401-2460_0.887_34_A
MethodGene