WormBase Tree Display for Gene: WBGene00042787

WBGene00042787 SMap: S_parent: Sequence: cb25.NA_214
  Identity: Version: 2
    Name: CGC_name: Cbr-cth-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG24746
      Molecular_name: CBG24746
        CBG24746.1
        CBP13016
      Other_name: CBG_24746 Accession_evidence: NDB HE601328
      Public_name: Cbr-cth-2
    DB_info: Database: NDB locus_tag CBG_24746
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:12 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-cth-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cth
    RNASeq_FPKM: WBls:0000002 173.216 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        246.616 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        277.471 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        289.162 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        174.664 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        226.068 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        228.628 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 11.7224 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        18.1857 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        5.25908 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        16.0293 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        24.6432 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 65.3909 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        67.425 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        69.4591 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        63.3452 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        67.8502 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        68.4841 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        76.3753 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 148.917 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        20.3425 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        360.945 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        65.4627 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        133.176 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        144.982 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        99.3194 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 182.119 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 116.596 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        145.853 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        198.777 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        251.702 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        354.873 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        905.34 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 135.058 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        137.095 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        142.794 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        148.492 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        177.599 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        289.752 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        219.122 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        242.727 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        314.257 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        431.709 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 246.584 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        248.004 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        254.526 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        287.041 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        302.87 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        478.196 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        163.534 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        251.265 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        279.647 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 182.119 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        213.5 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        168.375 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        201.08 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00145782
      00145783
    Ortholog (33)
    Paralog: WBGene00040669 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042884 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00088170 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable pyridoxal phosphate binding activity. Predicted to be involved in transsulfuration. Is an ortholog of C. elegans cth-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG24746
    Corresponding_CDS_history: CBG24746:bp194
    Corresponding_transcript: CBG24746.1
    Other_sequence (122)
  Experimental_info: Expr_pattern: Expr1050222
    Microarray_results: GPL8303_CB6_WBGene00042787_A
      GPL8303_CB6_WBGene00042787_B
      GPL14143_CBG24746_768-827_0.826_11_C
      GPL14143_CBG24746_943-1002_0.848_3_A
      GPL14143_CBG24746_1072-1131_0.699_118_B
  Method: Gene