WormBase Tree Display for Gene: WBGene00044032
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WBGene00044032 | SMap | S_parent | Sequence | T21B4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ceh | ||||||
Allele (173) | |||||||
Strain | WBStrain00049279 | ||||||
WBStrain00051089 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Ortholog | OTIPU.nOt.2.0.1.g08907 | Oscheius tipulae | From_analysis | WormBase-Compara | |||
WBGene00093277 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||
WBGene00279481 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||
WBGene00289727 | Trichuris muris | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00000429 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00000430 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00000432 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012584 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00018022 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018446 | |||||||
WBGene00022554 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | ceh-99 is a divergent homeobox gene; it encodes four homeodomains, and is located close to ceh-100 on chromosome II and may be a recent paralog; most homeodomain proteins bind DNA and function as transcription factors; ceh-99 is involved in axonal fasciculation. | Paper_evidence | WBPaper00046864 | |||
WBPaper00028984 | |||||||
WBPaper00037950 | |||||||
WBPaper00045521 | |||||||
Person_evidence | WBPerson83 | ||||||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 19 Apr 2017 00:00:00 | ||||||
Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in brain development; neuron differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T21B4.17 | |||||
Corresponding_CDS_history | T21B4.17:wp141 | ||||||
Corresponding_transcript | T21B4.17.1 | ||||||
Associated_feature | WBsf644758 | ||||||
WBsf644759 | |||||||
WBsf644760 | |||||||
WBsf978275 | |||||||
WBsf990128 | |||||||
WBsf1013450 | |||||||
WBsf222274 | |||||||
Transcription_factor | WBTranscriptionFactor000918 | ||||||
Experimental_info | RNAi_result | WBRNAi00107210 | Inferred_automatically | RNAi_primary | |||
WBRNAi00004754 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00066093 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr15656 | ||||||
Expr1027557 | |||||||
Expr1040166 | |||||||
Expr1157246 | |||||||
Expr1170055 | |||||||
Expr2009919 | |||||||
Expr2028159 | |||||||
Drives_construct | WBCnstr00023790 | ||||||
WBCnstr00042424 | |||||||
WBCnstr00042440 | |||||||
Construct_product | WBCnstr00023790 | ||||||
Microarray_results | A_12_P155550 | ||||||
GPL14144_T21B4.17_1108-1167_0.923_1_C | |||||||
GPL14144_T21B4.17_1425-1484_0.916_3_B | |||||||
GPL14144_T21B4.17_393-452_0.877_20_A | |||||||
GPL19516_CGZ0035811 | |||||||
GPL21109_T21B4.17 | |||||||
GPL8304_CE_WBGene00044032_A | |||||||
GPL8673_T21B4_17P00180 | |||||||
GPL8673_T21B4_17P01039 | |||||||
GPL8673_T21B4_17P01260 | |||||||
Expression_cluster (84) | |||||||
Interaction | WBInteraction000535151 | ||||||
WBInteraction000542494 | |||||||
Map_info | Map | II | Position | 10.2097 | Error | 0.002922 | |
Positive | Positive_clone | T21B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00060123 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |