WormBase Tree Display for Gene: WBGene00044272

WBGene00044272 SMap: S_parent: Sequence: H12D21
  Identity: Version: 2
    Name: CGC_name: nspa-4 Person_evidence: WBPerson1983
      Sequence_name: H12D21.13
      Molecular_name: H12D21.13
        H12D21.13.1
        CE15221
      Other_name: CELE_H12D21.13 Accession_evidence: NDB BX284605
      Public_name: nspa-4
    DB_info: Database: WormFlux gene WBGene00044272
        NDB locus_tag CELE_H12D21.13
        NCBI gene 3564808
        RefSeq protein NM_001028837.5
        TrEMBL UniProtAcc G5EDP8
        UniProt_GCRP UniProtAcc G5EDP8
    Species: Caenorhabditis elegans
    History: Version_change: 1 22 Mar 2005 15:20:40 WBPerson1983 Event: Created
        2 01 Apr 2005 11:59:21 WBPerson2970 Name_change: CGC_name: nspa-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspa
    Allele (24)
    RNASeq_FPKM (74)
    Ortholog: WBGene00027402 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00037775 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00158592 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00270986 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g5930 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      FL83_10514 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005198 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_005232 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00078007 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00010377 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012294 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013887 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013888 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044271 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in neurons and rectal epithelium based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; RNA-seq; and microarray studies. Is affected by twenty chemicals including hydrogen sulfide; Ethanol; and manganese chloride based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H12D21.13
    Corresponding_transcript: H12D21.13.1
    Other_sequence: CBC15445_1
      CRC07772_1
      CR03944
    Associated_feature: WBsf1002173
      WBsf1020939
  Experimental_info: RNAi_result: WBRNAi00058904 Inferred_automatically: RNAi_primary
      WBRNAi00021689 Inferred_automatically: RNAi_primary
      WBRNAi00054861 Inferred_automatically: RNAi_primary
      WBRNAi00016241 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1153103
      Expr2014449
      Expr2032690
    Drives_construct: WBCnstr00023666
    Construct_product: WBCnstr00023666
    Microarray_results: 172431_x_at
    Expression_cluster (140)
  Map_info: Map: V Position: 6.99559
    Positive: Positive_clone: H12D21 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene