WormBase Tree Display for Gene: WBGene00044344

WBGene00044344 SMap: S_parent: Sequence: Y46H3A
  Identity: Version: 2
    Name: CGC_name: mrpl-39 Person_evidence: WBPerson261
      Sequence_name: Y46H3A.7
      Molecular_name: Y46H3A.7a
        Y46H3A.7a.1
        CE38646
        Y46H3A.7b
      Other_name: CELE_Y46H3A.7 Accession_evidence: NDB BX284605
      Public_name: mrpl-39
    DB_info: Database: AceView gene 5C301
        WormFlux gene WBGene00044344
        NDB locus_tag CELE_Y46H3A.7
        Panther gene CAEEL|WormBase=WBGene00044344|UniProtKB=Q4W5T0
          family PTHR42753
        NCBI gene 3565110
        RefSeq protein NM_001029076.7
            NR_132516.1
        TrEMBL UniProtAcc Q4W5T0
        UniProt_GCRP UniProtAcc Q4W5T0
        OMIM gene 611845
        RNAcentral URSid URS000083B18B
    Species: Caenorhabditis elegans
    History: Version_change: 1 10 May 2005 10:52:40 WBPerson1867 Event: Created
        2 10 Jun 2011 16:50:10 WBPerson2970 Name_change: CGC_name: mrpl-39
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrpl
    Allele (29)
    RNASeq_FPKM (74)
    GO_annotation: 00081024
      00081025
      00146037
    Ortholog (33)
    Paralog: WBGene00004190 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004189 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006617 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable nucleotide binding activity. Predicted to be located in mitochondrion. Is an ortholog of human MRPL39 (mitochondrial ribosomal protein L39). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0060286 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14027)
  Molecular_info: Corresponding_CDS: Y46H3A.7a
    Corresponding_transcript: Y46H3A.7b
      Y46H3A.7a.1
    Other_sequence: CBC17091_1
      CJC02321_1
    Associated_feature: WBsf999397
      WBsf999398
      WBsf231440
  Experimental_info: RNAi_result: WBRNAi00020674 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024082
      Expr1040233
      Expr1160174
      Expr2013719
      Expr2031954
    Drives_construct: WBCnstr00023618
    Construct_product: WBCnstr00023618
    Microarray_results (16)
    Expression_cluster (96)
    Interaction: WBInteraction000586533
  Map_info: Map: V Position: -17.0121 Error: 0.0233
    Positive: Positive_clone: Y46H3A Inferred_automatically: From sequence, transcript, pseuodgene data
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene