WormBase Tree Display for Gene: WBGene00044668
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| WBGene00044668 | SMap | S_parent | Sequence | C18A3 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | C18A3.11 | ||||||
| Molecular_name | C18A3.11 | |||||||
| C18A3.11.1 | ||||||||
| CE39322 | ||||||||
| Other_name | CELE_C18A3.11 | Accession_evidence | NDB | BX284602 | ||||
| Public_name | C18A3.11 | |||||||
| DB_info | Database | AceView | gene | C18A3.11 | ||||
| WormFlux | gene | WBGene00044668 | ||||||
| NDB | locus_tag | CELE_C18A3.11 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00044668|UniProtKB=Q2V4T8 | ||||||
| family | PTHR47629 | |||||||
| NCBI | gene | 4363041 | ||||||
| RefSeq | protein | NM_001047279.1 | ||||||
| TREEFAM | TREEFAM_ID | TF322199 | ||||||
| TrEMBL | UniProtAcc | Q2V4T8 | ||||||
| UniProt_GCRP | UniProtAcc | Q2V4T8 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 11 Nov 2005 09:39:56 | WBPerson1867 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (17) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog (38) | ||||||||
| Paralog (117) | ||||||||
| Structured_description | Automated_description | Is affected by several genes including spn-4; alh-4; and rsr-2 based on tiling array and RNA-seq studies. Is affected by tryptophan based on microarray studies. Is predicted to encode a protein with the following domains: PAN-like domain and PAN-3 domain. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | C18A3.11 | ||||||
| Corresponding_transcript | C18A3.11.1 | |||||||
| Associated_feature | WBsf987943 | |||||||
| Experimental_info | Expr_pattern | Expr1011763 | ||||||
| Expr1144927 | ||||||||
| Drives_construct | WBCnstr00023412 | |||||||
| Construct_product | WBCnstr00023412 | |||||||
| Microarray_results (12) | ||||||||
| Expression_cluster | WBPaper00037950:all-neurons_L2-larva_expressed | |||||||
| WBPaper00037950:excretory-cell_L2-larva_expressed | ||||||||
| WBPaper00037950:intestine_L2-larva_expressed | ||||||||
| WBPaper00042194:Tryptophan_downregulated | ||||||||
| WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray | ||||||||
| WBPaper00045420:fertilization_downregulated_transcript | ||||||||
| WBPaper00058598:spn-4(tm291)_upregulated | ||||||||
| WBPaper00061653:alh-4(hj221)_upregulated | ||||||||
| WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR | ||||||||
| Map_info | Positive | Positive_clone | C18A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | II | -0.957945 | ||||||
| Method | Gene |
