WormBase Tree Display for Gene: WBGene00045215
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| WBGene00045215 | SMap | S_parent | Sequence | C02F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ceh-63 | Paper_evidence | WBPaper00040555 | |||||
| Person_evidence | WBPerson83 | ||||||||
| Sequence_name | C02F12.10 | ||||||||
| Molecular_name | C02F12.10a | ||||||||
| C02F12.10a.1 | |||||||||
| CE40680 | |||||||||
| C02F12.10b | |||||||||
| CE50485 | |||||||||
| C02F12.10b.1 | |||||||||
| Other_name | CELE_C02F12.10 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ceh-63 | ||||||||
| DB_info | Database | AceView | gene | XE292 | |||||
| WormFlux | gene | WBGene00045215 | |||||||
| NDB | locus_tag | CELE_C02F12.10 | |||||||
| NCBI | gene | 6418830 | |||||||
| RefSeq | protein | NM_001129622.4 | |||||||
| NM_001377614.1 | |||||||||
| SwissProt | UniProtAcc | A3FPJ2 | |||||||
| UniProt_GCRP | UniProtAcc | A3FPJ2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 Jan 2007 14:00:45 | WBPerson1867 | Event | Split_from | WBGene00015355 | ||
| 2 | 14 Feb 2012 11:53:26 | WBPerson2970 | Name_change | CGC_name | ceh-63 | ||||
| Split_from | WBGene00015355 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004283 | ||||||||
| 00004284 | |||||||||
| 00004285 | |||||||||
| 00004286 | |||||||||
| 00004287 | |||||||||
| 00004288 | |||||||||
| 00004289 | |||||||||
| 00004290 | |||||||||
| 00004291 | |||||||||
| 00146164 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Concise_description | ceh-63 encodes a homeobox protein of uncertain affinity, but with some similarity to vertebrate Hox3 proteins and the D. melanogster homeobox protein ROUGH; ceh-63 is expressed in a single tail neuron of hermaphrodites from late embryo to adult stages, as well as in a uterus cell separate from the vulva (perhaps in the spermetheca). | Paper_evidence | WBPaper00006525 | |||||
| WBPaper00029055 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 18 Jul 2016 00:00:00 | ||||||||
| Automated_description | Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in nucleus. Expressed in ganglia; head; tail; uterus; and in male. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02F12.10a | |||||||
| C02F12.10b | |||||||||
| Corresponding_transcript | C02F12.10a.1 | ||||||||
| C02F12.10b.1 | |||||||||
| Other_sequence | CJC06543_1 | ||||||||
| Associated_feature | WBsf670008 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00010005 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr7408 | ||||||||
| Expr9875 | |||||||||
| Expr9876 | |||||||||
| Expr9877 | |||||||||
| Expr15602 | |||||||||
| Expr1024674 | |||||||||
| Expr1143545 | |||||||||
| Expr2009899 | |||||||||
| Expr2028139 | |||||||||
| Drives_construct | WBCnstr00009824 | ||||||||
| WBCnstr00012551 | |||||||||
| WBCnstr00014374 | |||||||||
| WBCnstr00014440 | |||||||||
| WBCnstr00023295 | |||||||||
| WBCnstr00041958 | |||||||||
| Construct_product | WBCnstr00014374 | ||||||||
| WBCnstr00023295 | |||||||||
| WBCnstr00041958 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (68) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | X | Position | -9.83708 | |||||
| Positive | Positive_clone | C02F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034539 | ||||||||
| WBPaper00040555 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056703 | |||||||||
| WBPaper00060123 | |||||||||
| WBPaper00064415 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
