WormBase Tree Display for Gene: WBGene00050892
expand all nodes | collapse all nodes | view schema
| WBGene00050892 | SMap | S_parent | Sequence | F46B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-57 | Person_evidence | WBPerson4025 | |||||
| Sequence_name | F46B3.18 | ||||||||
| Molecular_name | F46B3.18 | ||||||||
| F46B3.18.1 | |||||||||
| CE43861 | |||||||||
| Other_name | CELE_F46B3.18 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-57 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00050892 | |||||
| NDB | locus_tag | CELE_F46B3.18 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00050892|UniProtKB=A8DZ50 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 6418740 | |||||||
| RefSeq | protein | NM_001129470.4 | |||||||
| TrEMBL | UniProtAcc | A8DZ50 | |||||||
| UniProt_GCRP | UniProtAcc | A8DZ50 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 18 Sep 2007 15:10:30 | WBPerson4025 | Event | Created | |||
| 2 | 09 Jan 2008 13:39:47 | WBPerson2970 | Name_change | CGC_name | ttr-57 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrV_pilon.g18128 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Enriched in DA neuron; I5 neuron; SAB; VA neuron; and retrovesicular ganglion based on microarray studies. Is affected by several genes including daf-2; eat-2; and eri-1 based on RNA-seq and microarray studies. Is affected by Doxycycline; paraquat; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F46B3.18 | |||||||
| Corresponding_CDS_history | F46B3.18:wp204 | ||||||||
| Corresponding_transcript | F46B3.18.1 | ||||||||
| Other_sequence | Oden_isotig18714 | ||||||||
| CSC01751_1 | |||||||||
| FD513970.1 | |||||||||
| Associated_feature | WBsf1003595 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00015059 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1018515 | ||||||||
| Expr1151318 | |||||||||
| Expr2017622 | |||||||||
| Expr2035761 | |||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (28) | |||||||||
| Map_info | Map | V | Position | 25.0213 | Error | 0.00106 | |||
| Positive | Positive_clone | F46B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
