WormBase Tree Display for Gene: WBGene00051267

WBGene00051267 SMap: S_parent: Sequence: Crem_Contig0
  Identity: Version: 3
    Name: CGC_name: Cre-ref-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE00505
      Molecular_name: CRE00505
        CRE00505.1
        RP07980
      Other_name: cr01.sctg0.wum.274
      Public_name: Cre-ref-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-ref-2
        3 03 Jul 2008 11:44:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE00505
                Other_name: cr01.sctg0.wum.274
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ref
    RNASeq_FPKM: WBls:0000004 7.73286 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        8.4087 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        9.08455 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.8019 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.4957 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        4.73536 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        5.87406 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        6.01143 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        7.01276 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.216359 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        0.354467 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.372682 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        0.474361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.171317 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.280619 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.401555 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.421426 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.462264 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.503102 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.509657 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.52321 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 0.19448 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.228611 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0.423186 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
            RNASeq.remanei.WBls:0000063.control_median
        3.80877 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
      WBls:0000101 0.326651 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.86799 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (40)
    Paralog: WBGene00055909 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00060731 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00085423 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00055910 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00058502 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00071058 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00085403 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00078379 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00060569 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00085393 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. Is an ortholog of C. elegans ref-2. In C. elegans, ref-2 is involved in several processes, including neuron fate specification; positive regulation of transcription by RNA polymerase II; and regulation of cell division. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE00505
    Corresponding_transcript: CRE00505.1
    Other_sequence (11)
  Experimental_info: Expr_pattern: Expr1098856
    Microarray_results: GPL14146_CRE00505_273-332_0.921_11_A
      GPL14146_CRE00505_390-449_0.922_10_B
      GPL14146_CRE00505_864-923_0.968_1_C
  Method: Gene