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WormBase Tree Display for Gene: WBGene00051288

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Name Class

WBGene00051288SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-pcca-1From_analysisInferred_from_orthology
Sequence_nameCRE00045
Molecular_nameCRE00045
CRE00045.1
RP38134
Other_namecr01.sctg0.wum.294
Public_nameCre-pcca-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-pcca-1
303 Jul 2008 11:44:22WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00045
Other_namecr01.sctg0.wum.294
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpcca
RNASeq_FPKMWBls:0000004138.104From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
139.65From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
141.195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024109.526From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
119.273From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
159.563From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
162.296From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
162.819From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
171.373From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
176.502From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
183.148From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
190.137From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
199.514From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
201.531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
204.905From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
209.806From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
219.27From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
232.228From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
232.268From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
243.334From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
249.697From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
262.338From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
270.324From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
308.253From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
311.195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
322.056From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
333.274From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
335.918From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
337.294From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
348.291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
349.937From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
350.7From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
369.832From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
392.583From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
419.092From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
427.315From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
440.895From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
456.426From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
456.666From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
468.693From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
505.145From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
524.256From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
530.82From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
550.713From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
561.277From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
561.55From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
580.878From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
609.739From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
615.611From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
619.419From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
66.2208From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
667.201From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
668.012From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
681.701From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
80.6002From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
90.3346From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
WBls:0000027139.899From_analysisRNASeq.remanei.WBls:0000027.control_mean
143.327From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
143.676From_analysisRNASeq.remanei.WBls:0000027.control_median
144.026From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
173.283From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
98.9617From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038145.7From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
177.595From_analysisRNASeq.remanei.WBls:0000038.control_mean
192.311From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
194.775From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041105.367From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
105.853From_analysisRNASeq.remanei.WBls:0000041.control_mean
107.721From_analysisRNASeq.remanei.WBls:0000041.control_median
110.075From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
116.775From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
122.678From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
89.9783From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
90.2426From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063176.525From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
176.758From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
180.591From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
188.791From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
189.408From_analysisRNASeq.remanei.WBls:0000063.control_mean
189.409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
190.844From_analysisRNASeq.remanei.WBls:0000063.control_median
192.279From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
195.774From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
196.977From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
198.155From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
198.821From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
WBls:0000101150.034From_analysisRNASeq.remanei.total_over_all_stages.control_mean
159.492From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00146506
OrthologWBGene00017864Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00036608Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00160183Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00137459Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00162486Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00113354Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g3307Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4147Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14629Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13553Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19984Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2866Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20558Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g22107Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1703Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17244Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g17253Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23416Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23473Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8800Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20838Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00329.g9286Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13332.g24183Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-pcca-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6612Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12418Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00473.g11829Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00131Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024820Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14693Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g8380Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0208900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19445Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00264730Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291124Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00052363Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00058645Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00062655Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00067771Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00067772Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00072101Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00072760Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00075142Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00083781Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity. Is an ortholog of C. elegans pcca-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00045
Corresponding_transcriptCRE00045.1
Other_sequenceAS04441
GE626105.1
AS01430
BM033644.1
PP01989
FE909901.1
EX912708.1
SSC00626_1
JI166140.1
Dviv_isotig07975
ALC00508_1
ACC00064_1
AE02254
CJC01326_1
CR08878
EW743736.1
Hbac_isotig04264
AS02899
EX547013.1
SRC05560_1
BG577870.1
ASC18470_1
ASC18053_1
EX007965.1
ES569719.1
JI257379.1
AS10438
TX00871
FC548201.1
Acan_isotig05880
EX558999.1
ASC04800_1
AIC00237_1
AE03153
FC555398.1
Dviv_isotig07972
AYC02733_1
FC814143.1
FG586644.1
JI214686.1
EY461065.1
BI781641.1
TM01169
EX550655.1
Tcol_isotig07085
FC539161.1
PTC01126_1
TMC00107_1
DVC03300_1
FC818620.1
FC554978.1
AYC03443_1
CR04020
FC820033.1
EX541746.1
FC819634.1
EV850661.1
CR02481
BXC07053_1
Acan_isotig05881
AS10274
FC818106.1
PP02385
FK806260.1
JI166335.1
AS02745
FC820208.1
Dviv_isotig07976
Oden_isotig21521
EH005158.1
CBC13886_1
BI773016.1
BI783387.1
ES413145.1
TCC00277_1
CBC06905_1
AS09945
TVC00544_1
ASC18246_1
TSC11459_1
Name_isotig01105
Tcol_isotig07084
CRC01919_1
EX536734.1
SRC03705_1
AS04341
FC819333.1
FC820172.1
Tcir_isotig05492
ES409563.1
EX549101.1
SS02173
SSC03040_1
SR03331
TV00296
BUC00436_1
ASC07316_1
EY460858.1
BI773093.1
ASC04215_1
FE909915.1
FE910294.1
ES880354.1
SR00383
FC819339.1
EX561017.1
HBC05993_1
FK804825.1
AYC04160_1
Dviv_isotig07974
HCC01442_1
SSC06251_1
BM277147.1
EX551748.1
JO472157.1
Hbac_isotig01240
AE04087
CRC07679_1
ES739571.1
BU586433.1
TMC00754_1
Dviv_isotig07971
BQ381675.1
EX540863.1
EX009655.1
TX00644
SS01506
Tcol_isotig07086
ASC00436_1
AE04905
CBC08218_1
HBC09260_1
FE906956.1
PPC01524_1
CR06716
ASC05993_1
HC03218
EX539957.1
OOC02146_1
EX558103.1
TCC00007_1
AS15768
PT00447
Dviv_isotig27922
Dviv_isotig07973
BU586850.1
TLC00028_1
Experimental_infoExpr_patternExpr1092891
Microarray_resultsGPL14146_CRE00045_1901-1960_0.941_3_A
GPL14146_CRE00045_1965-2024_0.751_152_C
GPL14146_CRE00045_2043-2102_0.943_2_B
MethodGene