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WormBase Tree Display for Gene: WBGene00051377

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Name Class

WBGene00051377SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-clec-86From_analysisInferred_from_orthology
Sequence_nameCRE00563
Molecular_nameCRE00563
CRE00563.1
RP13773
Other_namecr01.sctg0.wum.380
Public_nameCre-clec-86
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:23WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00563
Other_namecr01.sctg0.wum.380
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCre-clec-86
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
RNASeq_FPKMWBls:00000040.431232From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
1.2663From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.10137From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (51)
WBls:000002721.1353From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
25.1232From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
37.3945From_analysisRNASeq.remanei.WBls:0000027.control_mean
37.5914From_analysisRNASeq.remanei.WBls:0000027.control_median
50.0597From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
53.2599From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:000003835.159From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
46.121From_analysisRNASeq.remanei.WBls:0000038.control_mean
49.2062From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
53.9979From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004120.9222From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
32.0991From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
33.0525From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
36.2885From_analysisRNASeq.remanei.WBls:0000041.control_median
36.5044From_analysisRNASeq.remanei.WBls:0000041.control_mean
39.5245From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
43.9314From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
49.4969From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010133.815From_analysisRNASeq.remanei.total_over_all_stages.control_mean
34.1058From_analysisRNASeq.remanei.total_over_all_stages.control_median
Ortholog (17)
Paralog (14)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Is an ortholog of C. elegans clec-86. In C. elegans, clec-86 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00563
Corresponding_transcriptCRE00563.1
Other_sequenceCBC03154_1
Experimental_infoExpr_patternExpr1102474
Microarray_resultsGPL14146_CRE00563_407-466_0.966_1_A
MethodGene