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WormBase Tree Display for Gene: WBGene00051547

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Name Class

WBGene00051547SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-lite-1From_analysisInferred_from_orthology
Sequence_nameCRE00185
Molecular_nameCRE00185
CRE00185.1
RP04881
Other_namecr01.sctg0.wum.542
Public_nameCre-lite-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-lite-1
303 Jul 2008 11:44:25WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00185
Other_namecr01.sctg0.wum.542
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlite
RNASeq_FPKMWBls:00000040.117768From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.200554From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.283339From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.426661From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
3.06674From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.55003From_analysisRNASeq.remanei.WBls:0000027.control_mean
6.18933From_analysisRNASeq.remanei.WBls:0000027.control_median
9.31193From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
9.39479From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.576037From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
3.1565From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.94284From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
4.95063From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.743118From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.748926From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.76203From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.90465From_analysisRNASeq.remanei.WBls:0000041.control_median
1.04727From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.19234From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.76992From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
2.0828From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (11)
WBls:00001010.883488From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.8542From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00146799
00146800
Ortholog (19)
ParalogWBGene00058471Caenorhabditis remaneiFrom_analysisTreeFam
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in sensory perception of taste. Predicted to be located in membrane. Is an ortholog of C. elegans lite-1. In C. elegans, lite-1 is involved in locomotory behavior and response to light stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00185
Corresponding_transcriptCRE00185.1
Experimental_infoExpr_patternExpr1092325
Microarray_resultsGPL14146_CRE00185_1096-1155_0.905_11_A
MethodGene