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WormBase Tree Display for Gene: WBGene00051860

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Name Class

WBGene00051860SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-coel-1From_analysisInferred_from_orthology
Sequence_nameCRE00831
Molecular_nameCRE00831
CRE00831.1
RP31450
Other_namecr01.sctg0.wum.848
Public_nameCre-coel-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:28WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00831
Other_namecr01.sctg0.wum.848
304 Jul 2008 11:06:33WBPerson4055Name_changeCGC_nameCre-coel-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcoel
RNASeq_FPKMWBls:00000043.56222From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
4.32479From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
5.08736From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000271.47983From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
4.40302From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.01342From_analysisRNASeq.remanei.WBls:0000027.control_mean
5.5761From_analysisRNASeq.remanei.WBls:0000027.control_median
6.74918From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
7.42165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000381.08978From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.13166From_analysisRNASeq.remanei.WBls:0000038.control_mean
7.04829From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
7.2569From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004117.5431From_analysisRNASeq.remanei.WBls:0000041.control_median
19.0141From_analysisRNASeq.remanei.WBls:0000041.control_mean
25.2444From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
29.1621From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
30.5256From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
9.59663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
9.71393From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
9.84183From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:00001017.1526From_analysisRNASeq.remanei.total_over_all_stages.control_median
9.38246From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (28)
ParalogWBGene00059462Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Leucine-rich repeat domain superfamily and Ubiquitin-like domain superfamily. Is an ortholog of C. elegans coel-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00831
Corresponding_transcriptCRE00831.1
Other_sequence (26)
Experimental_infoExpr_patternExpr1117253
Microarray_resultsGPL14146_CRE00831_396-455_0.880_28_B
GPL14146_CRE00831_401-460_0.888_23_A
GPL14146_CRE00831_813-872_0.910_13_C
MethodGene