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WormBase Tree Display for Gene: WBGene00052426

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Name Class

WBGene00052426SMapS_parentSequenceCrem_Contig5
IdentityVersion3
NameCGC_nameCre-nhr-209From_analysisInferred_from_orthology
Sequence_nameCRE27049
Molecular_nameCRE27049
CRE27049.1
RP46516
Other_namecr01.sctg1.wum.302
Public_nameCre-nhr-209
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-nhr-209
303 Jul 2008 11:44:34WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27049
Other_namecr01.sctg1.wum.302
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000040.803267From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
1.12521From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.44715From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270.470856From_analysisRNASeq.remanei.WBls:0000027.control_median
0.941712From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.2791From_analysisRNASeq.remanei.WBls:0000027.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
4.17468From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.272445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
3.47736From_analysisRNASeq.remanei.WBls:0000038.control_mean
4.30729From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
5.85234From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.988168From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.1515From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.51413From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.53563From_analysisRNASeq.remanei.WBls:0000041.control_median
1.55713From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.64688From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.13663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
2.53374From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (11)
WBls:00001011.30976From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.69035From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147673
00147674
00147675
00147676
Ortholog (34)
Paralog (36)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-209.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27049
Corresponding_transcriptCRE27049.1
Other_sequenceCBC09032_1
Experimental_infoExpr_patternExpr1108712
Microarray_resultsGPL14146_CRE27049_1129-1188_0.921_10_A
GPL14146_CRE27049_1268-1327_0.912_15_B
GPL14146_CRE27049_644-703_0.910_16_C
MethodGene