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WormBase Tree Display for Gene: WBGene00052460

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Name Class

WBGene00052460SMapS_parentSequenceCrem_Contig5
IdentityVersion3
NameCGC_nameCre-rad-50From_analysisInferred_from_orthology
Sequence_nameCRE27070
Molecular_nameCRE27070
CRE27070.1
RP29356
Other_namecr01.sctg1.wum.336
Public_nameCre-rad-50
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-rad-50
303 Jul 2008 11:44:34WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27070
Other_namecr01.sctg1.wum.336
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrad
RNASeq_FPKMWBls:000000420.6581From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
22.8157From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
24.9732From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.962202From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
5.82879From_analysisRNASeq.remanei.WBls:0000027.control_mean
6.9213From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
7.22692From_analysisRNASeq.remanei.WBls:0000027.control_median
7.53254From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.89911From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.7015From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.78215From_analysisRNASeq.remanei.WBls:0000038.control_mean
7.49585From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
9.14911From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004117.8036From_analysisRNASeq.remanei.WBls:0000041.control_median
18.9028From_analysisRNASeq.remanei.WBls:0000041.control_mean
26.6609From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
29.2518From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
32.0355From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
8.17959From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
8.34276From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
8.94625From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001017.12955From_analysisRNASeq.remanei.total_over_all_stages.control_median
9.4865From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147722
00147723
00147724
00147725
00147726
00147727
Ortholog (40)
Structured_descriptionAutomated_descriptionPredicted to enable ATP hydrolysis activity. Predicted to be involved in double-strand break repair and telomere maintenance. Predicted to be located in nucleus. Predicted to be part of Mre11 complex. Is an ortholog of C. elegans rad-50.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27070
Corresponding_transcriptCRE27070.1
Other_sequence (37)
Experimental_infoExpr_patternExpr1105839
Microarray_resultsGPL14146_CRE27070_3410-3469_0.862_46_C
GPL14146_CRE27070_3534-3593_0.944_9_A
GPL14146_CRE27070_3841-3900_0.952_2_B
MethodGene