WormBase Tree Display for Gene: WBGene00053392

WBGene00053392 SMap: S_parent: Sequence: Crem_Contig1
  Identity: Version: 3
    Name: CGC_name: Cre-nsph-3.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE02222
      Molecular_name: CRE02222
        CRE02222.1
        RP14333
      Other_name: cr01.sctg2.wum.180
      Public_name: Cre-nsph-3.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:42 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE02222
                Other_name: cr01.sctg2.wum.180
        3 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cre-nsph-3.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nsph
    RNASeq_FPKM: WBls:0000004 0.244505 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.269343 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.294182 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (19)
      WBls:0000027 0.025572 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.102288 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
            RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 13.1836 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        14.8985 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        16.7332 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        7.91919 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 0.71146 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1139.28 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1204.97 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.29486 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.97932 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2276.57 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        2424.64 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2524.62 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 386.976 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        6.59541 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog (59)
    Paralog: WBGene00053307 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00076644 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00063925 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00055631 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00061601 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00078406 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066626 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00064148 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Cytosolic motility protein. Is an ortholog of C. elegans nsph-3.1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE02222
    Corresponding_transcript: CRE02222.1
    Other_sequence (66)
  Experimental_info: Expr_pattern: Expr1092536
    Microarray_results: GPL14146_CRE02222_370-429_0.846_66_C
      GPL14146_CRE02222_887-946_0.953_5_B
      GPL14146_CRE02222_998-1057_0.963_2_A
    Expression_cluster: WBPaper00054996:activated_sperm_CRE
  Method: Gene