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WormBase Tree Display for Gene: WBGene00053422

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Name Class

WBGene00053422SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-taf-13From_analysisInferred_from_orthology
Sequence_nameCRE02207
Molecular_nameCRE02207
CRE02207.1
RP26173
Other_namecr01.sctg2.wum.210
Public_nameCre-taf-13
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-taf-13
303 Jul 2008 11:44:42WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE02207
Other_namecr01.sctg2.wum.210
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtaf
RNASeq_FPKMWBls:0000004109.566From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
111.918From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
114.27From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002711.4069From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
20.8618From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
24.9058From_analysisRNASeq.remanei.WBls:0000027.control_median
25.2931From_analysisRNASeq.remanei.WBls:0000027.control_mean
28.9499From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
39.954From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003815.1979From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
40.6687From_analysisRNASeq.remanei.WBls:0000038.control_mean
48.5621From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
58.246From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041117.331From_analysisRNASeq.remanei.WBls:0000041.control_mean
120.077From_analysisRNASeq.remanei.WBls:0000041.control_median
141.267From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
142.55From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
147.946From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
85.169From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
88.1646From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
98.8877From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:000010135.0976From_analysisRNASeq.remanei.total_over_all_stages.control_median
53.708From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00148622
00148623
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable protein heterodimerization activity. Predicted to be involved in transcription by RNA polymerase II. Is an ortholog of C. elegans taf-13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE02207
Corresponding_transcriptCRE02207.1
Other_sequence (48)
Experimental_infoExpr_patternExpr1116896
Microarray_resultsGPL14146_CRE02207_159-218_0.946_2_B
GPL14146_CRE02207_208-267_0.929_6_A
GPL14146_CRE02207_293-352_0.941_3_C
MethodGene