WormBase Tree Display for Gene: WBGene00053565

WBGene00053565 SMap: S_parent: Sequence: Crem_Contig1
  Identity: Version: 3
    Name: CGC_name: Cre-vha-6 From_analysis: Inferred_from_orthology
      Sequence_name: CRE01751
      Molecular_name: CRE01751
        CRE01751.1
        RP46082
      Other_name: cr01.sctg2.wum.349
      Public_name: Cre-vha-6
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-vha-6
        3 03 Jul 2008 11:44:44 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE01751
                Other_name: cr01.sctg2.wum.349
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vha
    RNASeq_FPKM: WBls:0000004 1.81106 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        1.93155 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.05203 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 155.045 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        163.939 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        186.458 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        208.976 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        214.821 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        32.4439 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 149.639 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        184.269 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        206.941 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        57.708 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 46.6449 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        65.5981 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        68.4699 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        71.5893 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        71.9975 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        72.4057 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        72.9792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        81.602 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 111.729 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        132.982 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00148781
      00148782
      00148783
      00148784
    Ortholog (32)
    Paralog: WBGene00055212 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00059467 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00075032 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00075418 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00062672 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053564 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00081373 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans vha-6. In C. elegans, vha-6 is involved in nematode larval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE01751
    Corresponding_transcript: CRE01751.1
    Other_sequence (58)
  Experimental_info: Expr_pattern: Expr1097907
    Microarray_results: GPL14146_CRE01751_2143-2202_0.586_481_C
      GPL14146_CRE01751_2278-2337_0.778_155_B
      GPL14146_CRE01751_2547-2606_0.899_16_A
  Method: Gene