Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00053592

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00053592SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-gtf-2E2From_analysisInferred_from_orthology
Sequence_nameCRE01733
Molecular_nameCRE01733
CRE01733.1
RP09433
Other_namecr01.sctg2.wum.376
Public_nameCre-gtf-2E2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:44WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01733
Other_namecr01.sctg2.wum.376
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCre-gtf-2E2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgtf
RNASeq_FPKMWBls:0000004133.509From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
137.587From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
141.666From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002717.3432From_analysisRNASeq.remanei.WBls:0000027.control_mean
17.946From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
20.2069From_analysisRNASeq.remanei.WBls:0000027.control_median
22.4677From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
25.8976From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
3.06151From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003821.7566From_analysisRNASeq.remanei.WBls:0000038.control_mean
27.8476From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
32.7721From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
4.65003From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041119.166From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
123.822From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
135.283From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
30.0928From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
30.5086From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
34.7998From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
76.9829From_analysisRNASeq.remanei.WBls:0000041.control_median
78.9454From_analysisRNASeq.remanei.WBls:0000041.control_mean
WBls:0000063 (12)
WBls:000010128.9702From_analysisRNASeq.remanei.total_over_all_stages.control_median
44.7909From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00148827
00148828
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be part of transcription factor TFIIE complex. Is an ortholog of C. elegans gtf-2E2. In C. elegans, gtf-2E2 is involved in transcription initiation at RNA polymerase II promoter.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01733
Corresponding_transcriptCRE01733.1
Other_sequence (34)
Experimental_infoExpr_patternExpr1113479
Microarray_resultsGPL14146_CRE01733_459-518_0.933_11_B
GPL14146_CRE01733_657-716_0.947_5_C
GPL14146_CRE01733_731-790_0.966_1_A
MethodGene