WormBase Tree Display for Gene: WBGene00053803

WBGene00053803 SMap: S_parent: Sequence: Crem_Contig1
  Identity: Version: 3
    Name: CGC_name: Cre-rrf-3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE02010
      Molecular_name: CRE02010
        CRE02010.1
        RP37819
      Other_name: cr01.sctg2.wum.581
      Public_name: Cre-rrf-3
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-rrf-3
        3 03 Jul 2008 11:44:45 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE02010
                Other_name: cr01.sctg2.wum.581
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rrf
    RNASeq_FPKM: WBls:0000004 26.9527 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        27.6134 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        28.2742 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.639864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        3.95171 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        4.81151 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        4.97542 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        5.13933 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        5.21613 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 2.06154 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.83326 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.64532 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.79291 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 10.1361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        11.3002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        18.0395 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        18.6983 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        24.7788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        26.5156 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        29.723 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        9.73615 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 10.8679 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        7.95865 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00149066
    Ortholog (31)
    Paralog: WBGene00065457 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00065445 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00077398 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00068123 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00072189 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable RNA-dependent RNA polymerase activity. Is an ortholog of C. elegans rrf-3. In C. elegans, rrf-3 is involved in regulatory ncRNA-mediated heterochromatin formation and spermatogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE02010
    Corresponding_transcript: CRE02010.1
    Other_sequence: JI181815.1
      Acan_isotig16813
      CBC02376_1
      AE03845
      JI164335.1
      AYC02866_1
      HQ611978.1
      JI471910.1
      HQ611979.1
  Experimental_info: Expr_pattern: Expr1094291
    Microarray_results: GPL14146_CRE02010_3804-3863_0.833_80_C
      GPL14146_CRE02010_5036-5095_0.886_16_B
      GPL14146_CRE02010_5202-5261_0.939_1_A
  Method: Gene