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WormBase Tree Display for Gene: WBGene00053928

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Name Class

WBGene00053928SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-bcs-1From_analysisInferred_from_orthology
Sequence_nameCRE01941
Molecular_nameCRE01941
CRE01941.1
RP25360
Other_namecr01.sctg2.wum.703
Public_nameCre-bcs-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:46WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01941
Other_namecr01.sctg2.wum.703
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-bcs-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbcs
RNASeq_FPKMWBls:000000424.476From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
24.8605From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
25.245From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:000002410.3273From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
10.4134From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
11.3145From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
13.4663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
1.44335From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
21.8998From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
2.26909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
2.47198From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
2.52184From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
2.68979From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
2.95693From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
3.11904From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
3.39803From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
3.46078From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
3.46616From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
3.47325From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
3.56098From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
3.70639From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
3.82156From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
3.95267From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
3.96222From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
39.994From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
4.16194From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
4.31395From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
4.43024From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
4.58035From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
4.7089From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
4.96969From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
5.26811From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
5.27058From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
5.43538From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
5.56247From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
5.60132From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
5.66029From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
5.87854From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
6.00965From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
6.1015From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
6.35622From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
6.62131From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
6.63091From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
6.65083From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
7.23817From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
7.52861From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
7.79611From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
7.83271From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
7.99945From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
8.01215From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
8.07086From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
8.30846From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
8.47104From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
9.39811From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
9.58955From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
9.79291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
WBls:000002710.1909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
10.9632From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
2.71974From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
6.35702From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.55771From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.27396From_analysisRNASeq.remanei.WBls:0000027.control_median
WBls:000003811.7748From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
1.18027From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
13.5196From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
8.82489From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:000004112.9939From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
13.3212From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
14.6233From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
18.3153From_analysisRNASeq.remanei.WBls:0000041.control_median
19.827From_analysisRNASeq.remanei.WBls:0000041.control_mean
22.0072From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
27.4908From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
28.5257From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:000006310.0232From_analysisRNASeq.remanei.WBls:0000063.control_mean
10.8756From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
11.0483From_analysisRNASeq.remanei.WBls:0000063.control_median
11.2209From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
11.7559From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
11.9247From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
13.8126From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
14.3304From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
8.4469From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
8.80255From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
9.06219From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
WBls:000010111.7654From_analysisRNASeq.remanei.total_over_all_stages.control_median
12.5239From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00149227
00149228
OrthologWBGene00010042Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00023935Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00148417Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00097492Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00123910Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00224612Brugia malayiFrom_analysisWormBase-Compara
WBGene00244852Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g7028Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14191Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10701Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17116Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21903Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16752Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4253Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7674Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14210Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12869Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00305.g8887Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00305.g8888Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-bcs-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21355Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01039.g17828Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04608Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004937Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13577Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9568Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20247100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5287Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00257246Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290528Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP hydrolysis activity. Is an ortholog of C. elegans bcs-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01941
Corresponding_CDS_historyCRE01941:rp215
Corresponding_transcriptCRE01941.1
Other_sequenceDviv_isotig06266
Dviv_isotig06264
Dviv_isotig06270
EX561580.1
JI466903.1
RS06099
Tcol_isotig14516
Dviv_isotig06272
Dviv_isotig06265
Dviv_isotig06257
Oden_isotig20621
Tcol_isotig17492
Dviv_isotig06268
BMC00755_1
CR03911
Dviv_isotig06262
JI171498.1
EX557520.1
Dviv_isotig06259
OVC08793_1
Acan_isotig06961
CR10873
RSC02707_1
CJC00478_1
Dviv_isotig06269
Dviv_isotig06263
Dviv_isotig06258
Dviv_isotig06260
Dviv_isotig06271
Dviv_isotig06261
CR10874
CRC05339_1
Dviv_isotig06267
BF718850.1
ACC16570_1
JI482232.1
Experimental_infoExpr_patternExpr1107280
Microarray_resultsGPL14146_CRE01941_1021-1080_0.912_13_B
GPL14146_CRE01941_1291-1350_0.959_1_A
GPL14146_CRE01941_954-1013_0.829_68_C
MethodGene