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WormBase Tree Display for Gene: WBGene00054105

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Name Class

WBGene00054105SMapS_parentSequenceCrem_Contig6
IdentityVersion4
NameCGC_nameCre-utp-20From_analysisInferred_from_orthology
Sequence_nameCRE26526
Molecular_nameCRE26526
CRE26526.1
RP37199
Other_namecr01.sctg3.wum.125
Cre-tag-184From_analysisInferred_from_orthology
Public_nameCre-utp-20
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-tag-184
303 Jul 2008 11:44:47WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE26526
Other_namecr01.sctg3.wum.125
420 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-utp-20
Other_nameCre-tag-184
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classutp
RNASeq_FPKMWBls:000000419.3224From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
20.1649From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
21.0073From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002714.8627From_analysisRNASeq.remanei.WBls:0000027.control_mean
17.0608From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
17.4445From_analysisRNASeq.remanei.WBls:0000027.control_median
17.8281From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1.89641From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
22.6655From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:000003810.0014From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
2.64864From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
7.14738From_analysisRNASeq.remanei.WBls:0000038.control_mean
8.79211From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
WBls:000004110.2842From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
13.5957From_analysisRNASeq.remanei.WBls:0000041.control_mean
13.8068From_analysisRNASeq.remanei.WBls:0000041.control_median
17.3293From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
17.4445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
18.9165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
8.2626From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
9.3373From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010110.1498From_analysisRNASeq.remanei.total_over_all_stages.control_median
11.2959From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (34)
ParalogWBGene00054103Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Armadillo-type fold; Down-regulated-in-metastasis protein; and Down-regulated in metastasis. Is an ortholog of C. elegans utp-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE26526
Corresponding_transcriptCRE26526.1
Other_sequenceCBC16392_1
CJC17974_1
Experimental_infoExpr_patternExpr1116552
Microarray_resultsGPL14146_CRE26526_4050-4109_0.907_17_A
GPL14146_CRE26526_4151-4210_0.716_407_C
GPL14146_CRE26526_4307-4366_0.900_21_B
MethodGene