WormBase Tree Display for Gene: WBGene00054201

WBGene00054201 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-hrpl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26483
      Molecular_name: CRE26483
        CRE26483.1
        RP36686
      Other_name: cr01.sctg3.wum.218
      Public_name: Cre-hrpl-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:48 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26483
                Other_name: cr01.sctg3.wum.218
        3 22 Dec 2017 13:03:49 WBPerson1983 Name_change: CGC_name: Cre-hrpl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hrpl
    RNASeq_FPKM: WBls:0000004 23.5088 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        26.0557 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        28.6027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 10.0661 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        17.2625 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        17.8397 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        18.4169 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        20.9553 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        38.0757 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 10.5175 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        11.8266 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        11.9869 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        7.73894 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 17.1673 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        18.0531 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        18.5945 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        24.0775 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        24.2218 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        29.849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        29.8868 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        30.9141 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 16.8406 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        16.9703 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149527
      00149528
      00149529
      00149530
    Ortholog (38)
    Paralog: WBGene00053435 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00077968 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in mRNA processing. Predicted to be located in nucleus. Is an ortholog of C. elegans hrpl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26483
    Corresponding_transcript: CRE26483.1
    Other_sequence (24)
  Experimental_info: Expr_pattern: Expr1105663
    Microarray_results: GPL14146_CRE26483_1470-1529_0.937_2_C
      GPL14146_CRE26483_432-491_0.838_54_A
      GPL14146_CRE26483_559-618_0.854_42_B
  Method: Gene