WormBase Tree Display for Gene: WBGene00054250

WBGene00054250 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-him-14 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26183
      Molecular_name: CRE26183
        CRE26183.1
        RP41255
      Other_name: cr01.sctg3.wum.265
      Public_name: Cre-him-14
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-him-14
        3 03 Jul 2008 11:44:48 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26183
                Other_name: cr01.sctg3.wum.265
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: him
    RNASeq_FPKM: WBls:0000004 10.0976 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        10.179 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        10.2604 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (50)
      WBls:0000027 0.758116 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.874753 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        0.948942 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.02313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.13458 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 1.39631 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.14901 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.69728 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.35343 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 12.6963 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        12.6982 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        17.0564 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        17.2007 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        17.596 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        7.69132 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        8.29347 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        8.34006 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 4.75013 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        6.04429 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149572
      00149573
      00149574
    Ortholog (29)
    Paralog: WBGene00056429 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00057166 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00062315 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and mismatched DNA binding activity. Predicted to be involved in mismatch repair. Is an ortholog of C. elegans him-14. In C. elegans, him-14 is involved in chiasma assembly; embryo development; and resolution of meiotic recombination intermediates. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26183
    Corresponding_transcript: CRE26183.1
    Other_sequence (12)
  Experimental_info: Expr_pattern: Expr1113689
    Microarray_results: GPL14146_CRE26183_1201-1260_0.846_52_C
      GPL14146_CRE26183_1586-1645_0.875_25_B
      GPL14146_CRE26183_1659-1718_0.796_101_A
  Method: Gene