WormBase Tree Display for Gene: WBGene00054909

WBGene00054909 SMap: S_parent: Sequence: Crem_Contig7
  Identity: Version: 3
    Name: CGC_name: Cre-mdt-19 From_analysis: Inferred_from_orthology
      Sequence_name: CRE25489
      Molecular_name: CRE25489
        CRE25489.1
        RP26754
      Other_name: cr01.sctg4.wum.264
      Public_name: Cre-mdt-19
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-mdt-19
        3 03 Jul 2008 11:44:53 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE25489
                Other_name: cr01.sctg4.wum.264
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    RNASeq_FPKM: WBls:0000004 186.28 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        195.488 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        204.696 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.500398 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        12.3333 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        16.4791 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        18.6462 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        24.9592 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        28.1236 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 20.6157 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.28012 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        27.9596 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        31.6073 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 115.206 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        138.276 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        139.34 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        24.039 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        25.8537 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        27.5738 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        71.3899 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        78.3814 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 (12)
      WBls:0000101 23.3037 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        44.8349 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00150240
      00150241
      00150242
    Ortholog (23)
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex. Is an ortholog of C. elegans mdt-19. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE25489
    Corresponding_transcript: CRE25489.1
    Other_sequence: Oden_isotig21015
      JI220175.1
      CRC08375_1
      Tcir_isotig14441
      CR04088
  Experimental_info: Expr_pattern: Expr1116484
    Microarray_results: GPL14146_CRE25489_165-224_0.922_7_B
      GPL14146_CRE25489_317-376_0.939_3_A
      GPL14146_CRE25489_449-508_0.956_1_C
  Method: Gene