WormBase Tree Display for Gene: WBGene00054940

WBGene00054940 SMap: S_parent: Sequence: Crem_Contig7
  Identity: Version: 3
    Name: CGC_name: Cre-ttll-4 From_analysis: Inferred_from_orthology
      Sequence_name: CRE25506
      Molecular_name: CRE25506
        CRE25506.1
        RP00805
      Other_name: cr01.sctg4.wum.293
      Public_name: Cre-ttll-4
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-ttll-4
        3 03 Jul 2008 11:44:53 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE25506
                Other_name: cr01.sctg4.wum.293
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttll
    RNASeq_FPKM: WBls:0000004 51.8306 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        51.8605 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        51.8904 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 1.41396 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        21.2105 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        25.3353 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        26.3101 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        27.2849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        30.8079 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 20.3021 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        28.0488 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        29.3258 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.53165 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 18.6728 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        20.0563 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        21.404 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        35.6363 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        36.9303 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        49.8687 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        54.4542 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        57.1259 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 22.4379 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        26.1557 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00150284
      00150285
    Ortholog (30)
    Paralog: WBGene00064779 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00068446 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00063577 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00065088 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00062273 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity. Predicted to be involved in protein modification process. Is an ortholog of C. elegans ttll-4. In C. elegans, ttll-4 is involved in response to hermaphrodite contact. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE25506
    Corresponding_transcript: CRE25506.1
    Other_sequence (24)
  Experimental_info: Expr_pattern: Expr1092574
    Microarray_results: GPL14146_CRE25506_1350-1409_0.925_17_C
      GPL14146_CRE25506_1579-1638_0.943_5_A
      GPL14146_CRE25506_1732-1791_0.964_1_B
  Method: Gene