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WormBase Tree Display for Gene: WBGene00054986

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Name Class

WBGene00054986SMapS_parentSequenceCrem_Contig7
IdentityVersion3
NameCGC_nameCre-ttr-3From_analysisInferred_from_orthology
Sequence_nameCRE25239
Molecular_nameCRE25239
CRE25239.1
RP34683
Other_namecr01.sctg4.wum.339
Public_nameCre-ttr-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-ttr-3
303 Jul 2008 11:44:54WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE25239
Other_namecr01.sctg4.wum.339
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
RNASeq_FPKMWBls:00000042.07708From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.3082From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.53932From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002713.7131From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.80109From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.8948From_analysisRNASeq.remanei.WBls:0000027.control_median
6.37568From_analysisRNASeq.remanei.WBls:0000027.control_mean
9.98851From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003831.7944From_analysisRNASeq.remanei.WBls:0000038.control_mean
39.6869From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
4.86332From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
50.8329From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004119.7039From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
21.5338From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
23.9168From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
34.2215From_analysisRNASeq.remanei.WBls:0000041.control_median
35.7876From_analysisRNASeq.remanei.WBls:0000041.control_mean
44.5263From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
52.0353From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
53.0097From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010131.5015From_analysisRNASeq.remanei.total_over_all_stages.control_mean
34.9337From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00150307
Ortholog (15)
Paralog (62)
Structured_descriptionAutomated_descriptionPredicted to be located in cell surface. Is an ortholog of C. elegans ttr-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE25239
Corresponding_transcriptCRE25239.1
Other_sequence (12)
Experimental_infoExpr_patternExpr1092577
Microarray_resultsGPL14146_CRE25239_11-70_0.809_21_C
GPL14146_CRE25239_197-256_0.702_31_B
GPL14146_CRE25239_338-397_0.944_4_A
MethodGene