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WormBase Tree Display for Gene: WBGene00055271

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Name Class

WBGene00055271SMapS_parentSequenceCrem_Contig239
IdentityVersion3
NameCGC_nameCre-far-1From_analysisInferred_from_orthology
Sequence_nameCRE29196
Molecular_nameCRE29196
CRE29196.1
RP07405
Other_namecr01.sctg4.wum.616
Public_nameCre-far-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-far-1
303 Jul 2008 11:44:55WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29196
Other_namecr01.sctg4.wum.616
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfar
RNASeq_FPKMWBls:0000004113.089From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
115.608From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
118.128From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000272011.1From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
3886.16From_analysisRNASeq.remanei.WBls:0000027.control_mean
4264.91From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4402.58From_analysisRNASeq.remanei.WBls:0000027.control_median
4540.26From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
4728.35From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000382042.92From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
3084.72From_analysisRNASeq.remanei.WBls:0000038.control_mean
3570.99From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
3640.24From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000411360.89From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1493.98From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1540.39From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1568.52From_analysisRNASeq.remanei.WBls:0000041.control_median
1572.53From_analysisRNASeq.remanei.WBls:0000041.control_mean
1596.64From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
1702.63From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1740.67From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:00001012027.01From_analysisRNASeq.remanei.total_over_all_stages.control_median
2202.87From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00150659
Ortholog (34)
ParalogWBGene00064701Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00055272Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00059010Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00059009Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00059008Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00057827Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00071192Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lipid binding activity. Is an ortholog of C. elegans far-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29196
Corresponding_transcriptCRE29196.1
Other_sequence (132)
Experimental_infoExpr_patternExpr1098857
Microarray_resultsGPL14146_CRE29196_249-308_0.940_4_B
GPL14146_CRE29196_387-446_0.934_9_C
GPL14146_CRE29196_395-454_0.957_1_A
MethodGene