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WormBase Tree Display for Gene: WBGene00055633

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Name Class

WBGene00055633SMapS_parentSequenceCrem_Contig12
IdentityVersion3
NameCGC_nameCre-daf-4From_analysisInferred_from_orthology
Sequence_nameCRE04737
Molecular_nameCRE04737
CRE04737.1
RP40015
Other_namecr01.sctg5.wum.348
Public_nameCre-daf-4
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-daf-4
303 Jul 2008 11:44:57WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE04737
Other_namecr01.sctg5.wum.348
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdaf
RNASeq_FPKMWBls:00000044.78945From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
5.02999From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
5.27053From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.7836From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
14.3463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
2.74705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.91803From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
8.94874From_analysisRNASeq.remanei.WBls:0000027.control_mean
9.35081From_analysisRNASeq.remanei.WBls:0000027.control_median
WBls:00000380.572683From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
10.6679From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
6.30569From_analysisRNASeq.remanei.WBls:0000038.control_mean
7.67649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
WBls:000004110.8266From_analysisRNASeq.remanei.WBls:0000041.control_median
11.1706From_analysisRNASeq.remanei.WBls:0000041.control_mean
12.8607From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
14.9227From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
15.5834From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
6.74574From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
8.11841From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
8.79245From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:00001016.05855From_analysisRNASeq.remanei.total_over_all_stages.control_median
6.32892From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00151101
00151102
00151103
00151104
00151105
00151106
Ortholog (36)
ParalogWBGene00054054Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00059514Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and transmembrane receptor protein serine/threonine kinase activity. Predicted to be involved in transmembrane receptor protein serine/threonine kinase signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans daf-4. In C. elegans, daf-4 is involved in several processes, including defense response to other organism; regulation of BMP signaling pathway; and regulation of anatomical structure morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04737
Corresponding_transcriptCRE04737.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1097879
Microarray_resultsGPL14146_CRE04737_1409-1468_0.897_34_B
GPL14146_CRE04737_1519-1578_0.916_20_A
GPL14146_CRE04737_1786-1845_0.938_8_C
MethodGene