WormBase Tree Display for Gene: WBGene00055663

WBGene00055663 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 3
    Name: CGC_name: Cre-pqn-25 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04554
      Molecular_name: CRE04554
        CRE04554.1
        RP26734
      Other_name: cr01.sctg5.wum.376
      Public_name: Cre-pqn-25
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-pqn-25
        3 03 Jul 2008 11:44:58 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04554
                Other_name: cr01.sctg5.wum.376
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqn
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
            RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
            RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (53)
      WBls:0000027 1.59204 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        16.952 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.7461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        7.98849 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        8.23088 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        8.63025 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 1.12144 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.14713 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        2.17145 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.24577 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 2.86139 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.50181 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.51351 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        4.77176 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        4.81744 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        6.03001 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        6.42365 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        6.57427 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 3.22671 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.8416 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (26)
    Paralog: WBGene00053191 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00051311 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00051658 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00051659 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00077899 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Lustrin, cysteine-rich repeated domain; EB domain; Lustrin, cysteine-rich repeated; EB module; Cysteine-rich repeat; and EGF-like domain. Is an ortholog of C. elegans pqn-25. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04554
    Corresponding_transcript: CRE04554.1
    Other_sequence: Tcol_isotig16573
      CJC00793_1
      CBC03309_1
  Experimental_info: Expr_pattern: Expr1106305
    Microarray_results: GPL14146_CRE04554_2061-2120_0.924_13_B
      GPL14146_CRE04554_2149-2208_0.925_11_C
      GPL14146_CRE04554_2277-2336_0.933_7_A
  Method: Gene