WormBase Tree Display for Gene: WBGene00055729

WBGene00055729 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 3
    Name: CGC_name: Cre-unc-50 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04788
      Molecular_name: CRE04788
        CRE04788.1
        RP38120
      Other_name: cr01.sctg5.wum.440
      Public_name: Cre-unc-50
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:58 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04788
                Other_name: cr01.sctg5.wum.440
        3 04 Jul 2008 11:06:36 WBPerson4055 Name_change: CGC_name: Cre-unc-50
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 45.8863 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        46.8877 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        47.8892 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 10.5643 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        11.7519 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        12.6489 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        12.697 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        13.0857 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        13.3283 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        14.3308 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        14.3404 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        15.4644 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        15.7636 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        16.0515 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        17.2551 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        17.9077 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        19.3174 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        20.6256 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        21.1407 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        22.5731 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        23.3136 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        23.7259 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        24.1622 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        24.5779 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        26.2776 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        2.87432 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        31.1153 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        32.153 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        33.0039 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        33.7239 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        35.0026 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        35.4231 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        37.1215 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        3.7956 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        39.2315 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        4.19804 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        44.1917 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        47.6787 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        55.0414 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        56.0076 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        6.02372 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        6.40027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        6.56356 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        6.88876 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        6.96604 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        7.0645 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        7.13299 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        7.13586 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        7.60898 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        7.68093 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        7.72414 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        8.03721 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        8.33189 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        8.46286 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        8.72912 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        9.85216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
      WBls:0000027 33.962 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        37.0234 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        40.6769 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        44.3305 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        47.1393 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.35495 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 12.9521 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        44.4146 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        56.5307 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        63.7609 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 108.199 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        52.4466 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        60.8922 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        63.7734 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        73.6477 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        78.0809 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        83.5219 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        99.6521 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 30.687 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        32.5427 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        36.1916 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        36.2751 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        47.672 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        50.366 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        52.733 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        55.1 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        56.2076 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        56.8994 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        59.4548 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        62.9954 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
      WBls:0000101 50.3105 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        51.4063 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog: WBGene00006785 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00042682 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00164234 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120915 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00225887 Brugia malayi From_analysis: WormBase-Compara
      WBGene00245977 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00204467 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g4328 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7269 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14954 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9528 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15238 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2660 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15888 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3086 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16029 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g14025 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g477 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-unc-50 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7394 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00332.g9568 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13496 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010499 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08112 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22480 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30119200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8842 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00262643 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288348 Trichuris muris From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: UNC-50 and UNC-50 family. Is an ortholog of C. elegans unc-50. In C. elegans, unc-50 is involved in receptor localization to synapse and regulation of muscle contraction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04788
    Corresponding_transcript: CRE04788.1
    Other_sequence: HG01471
      DN152853.1
      ACC39928_1
      MCC00757_1
      Tcol_isotig13677
      JI211064.1
      AS12038
      Dviv_isotig13779
      ASC11556_1
      Hbac_isotig04081
      HG05147
      LSC01606_1
      CBC05290_1
      ES561464.1
      CR12389
      AS11525
      HGC02417_1
      Dviv_isotig13782
      MC01813
      HGC12209_1
      ASC03440_1
      PPC07763_1
      ACC00994_1
      EX560400.1
      TSC10828_1
      Dviv_isotig13781
      HQ116822.1
      CD203435.1
      ES570451.1
      Tcir_isotig06429
      XI04519
      RSC04144_1
      Oden_isotig10343
      HBC28200_1
      Acan_isotig09116
      FG619621.1
      CR01169
      HG05304
      TSC10380_1
      Dviv_isotig13780
      XIC05042_1
      HG05305
      JI170874.1
      CJC04265_1
      CRC01927_1
      HGC04896_1
      BM517665.1
      HG09146
      FG348790.1
      EX562048.1
      RS09206
      Oden_isotig10344
  Experimental_info: Expr_pattern: Expr1096361
    Microarray_results: GPL14146_CRE04788_223-282_0.899_10_A
      GPL14146_CRE04788_768-827_0.940_1_B
      GPL14146_CRE04788_862-921_0.877_17_C
  Method: Gene