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WormBase Tree Display for Gene: WBGene00055753

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Name Class

WBGene00055753SMapS_parentSequenceCrem_Contig12
IdentityVersion3
NameCGC_nameCre-prp-3From_analysisInferred_from_orthology
Sequence_nameCRE04802
Molecular_nameCRE04802
CRE04802.1
RP38821
Other_namecr01.sctg5.wum.463
Public_nameCre-prp-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:58WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE04802
Other_namecr01.sctg5.wum.463
322 Nov 2011 16:34:04WBPerson2970Name_changeCGC_nameCre-prp-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classprp
RNASeq_FPKMWBls:000000488.0433From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
88.7286From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
89.4139From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000271.7914From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
26.1497From_analysisRNASeq.remanei.WBls:0000027.control_mean
30.8907From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
32.1931From_analysisRNASeq.remanei.WBls:0000027.control_median
33.4954From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
38.4214From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003817.3893From_analysisRNASeq.remanei.WBls:0000038.control_mean
23.597From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
24.2951From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
4.27571From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004123.4308From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
28.0458From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
29.4032From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
49.8834From_analysisRNASeq.remanei.WBls:0000041.control_median
51.1611From_analysisRNASeq.remanei.WBls:0000041.control_mean
70.3637From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
73.2733From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
82.4498From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:000010114.4341From_analysisRNASeq.remanei.total_over_all_stages.control_median
25.9714From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00151216
00151217
Ortholog (28)
ParalogWBGene00078735Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of U4/U6 x U5 tri-snRNP complex. Is an ortholog of C. elegans prp-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04802
Corresponding_transcriptCRE04802.1
Other_sequence (41)
Experimental_infoExpr_patternExpr1095576
Microarray_resultsGPL14146_CRE04802_1279-1338_0.957_1_A
GPL14146_CRE04802_720-779_0.748_112_B
GPL14146_CRE04802_898-957_0.481_240_C
MethodGene