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WormBase Tree Display for Gene: WBGene00055833

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Name Class

WBGene00055833SMapS_parentSequenceCrem_Contig12
IdentityVersion3
NameCGC_nameCre-oxi-1From_analysisInferred_from_orthology
Sequence_nameCRE04630
Molecular_nameCRE04630
CRE04630.1
RP43556
Other_namecr01.sctg5.wum.540
Public_nameCre-oxi-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-oxi-1
303 Jul 2008 11:44:58WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE04630
Other_namecr01.sctg5.wum.540
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classoxi
RNASeq_FPKMWBls:000000432.5531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
33.2711From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
33.9891From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.5597From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.28238From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.08294From_analysisRNASeq.remanei.WBls:0000027.control_mean
7.24246From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
8.24484From_analysisRNASeq.remanei.WBls:0000027.control_median
9.24722From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003810.9252From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
1.09874From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
11.5571From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
7.86035From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:000004118.2457From_analysisRNASeq.remanei.WBls:0000041.control_median
18.4984From_analysisRNASeq.remanei.WBls:0000041.control_mean
29.8244From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
30.5818From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
31.2328From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
6.29953From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
6.38463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
6.66704From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010111.9121From_analysisRNASeq.remanei.total_over_all_stages.control_mean
9.19182From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00151339
Ortholog (31)
Paralog (13)
Structured_descriptionAutomated_descriptionPredicted to enable ubiquitin-protein transferase activity. Is an ortholog of C. elegans oxi-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04630
Corresponding_transcriptCRE04630.1
Other_sequence (44)
Experimental_infoExpr_patternExpr1116474
Microarray_resultsGPL14146_CRE04630_2496-2555_0.863_24_C
GPL14146_CRE04630_2876-2935_0.914_4_B
GPL14146_CRE04630_3138-3197_0.933_1_A
MethodGene