WormBase Tree Display for Gene: WBGene00055902

WBGene00055902 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 4
    Name: Sequence_name: CRE04880
      Molecular_name: CRE04880
        CRE04880.1
        RP45280
      Other_name: cr01.sctg5.wum.600
      Public_name: CRE04880
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:59 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04880
                Other_name: cr01.sctg5.wum.600
        3 04 Jul 2013 14:05:09 WBPerson2970 Name_change: CGC_name: Cre-snpc-3.3
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000004 28.9078 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        29.5331 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        30.1585 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.637601 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.82304 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        1.95466 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        2.01365 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        2.08628 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        3.50767 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 10.8865 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        3.87373 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        8.24782 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        9.98322 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 19.546 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        20.0425 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        20.4385 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        38.2128 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        39.0013 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        55.9872 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        58.8429 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        59.1507 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 14.7778 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        18.0643 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (36)
    Paralog: WBGene00061600 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: snRNA-activating protein complex (SNAPc), subunit 3 and snRNA-activating protein complex, subunit 3. Is an ortholog of C. elegans snpc-3.1 and snpc-3.2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04880
    Corresponding_transcript: CRE04880.1
    Other_sequence: CRC12144_1
      Dviv_isotig09378
      CR08344
      CBC11499_1
      Dviv_isotig09379
  Experimental_info: Expr_pattern: Expr1103498
    Microarray_results: GPL14146_CRE04880_1267-1326_0.964_1_A
      GPL14146_CRE04880_3-62_0.641_256_B
      GPL14146_CRE04880_346-405_0.895_37_C
  Remark: [180319 gw3] The CGC name Cre-snpc-3.3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene