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WormBase Tree Display for Gene: WBGene00056161

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Name Class

WBGene00056161SMapS_parentSequenceCrem_Contig4
IdentityVersion3
NameCGC_nameCre-sin-3From_analysisInferred_from_orthology
Sequence_nameCRE28517
Molecular_nameCRE28517
CRE28517.1
RP28944
Other_namecr01.sctg6.wum.238
Public_nameCre-sin-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-sin-3
303 Jul 2008 11:45:02WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28517
Other_namecr01.sctg6.wum.238
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsin
RNASeq_FPKMWBls:0000004101.779From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
104.846From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
107.913From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002717.8147From_analysisRNASeq.remanei.WBls:0000027.control_mean
18.8425From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
21.6904From_analysisRNASeq.remanei.WBls:0000027.control_median
24.5383From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
25.1411From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
2.73708From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003810.0651From_analysisRNASeq.remanei.WBls:0000038.control_mean
13.461From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
13.9012From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
2.8331From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004124.3571From_analysisRNASeq.remanei.WBls:0000041.control_median
24.7915From_analysisRNASeq.remanei.WBls:0000041.control_mean
39.1707From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
40.2781From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
41.5299From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
8.70276From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
9.52394From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
9.54352From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010120.7834From_analysisRNASeq.remanei.total_over_all_stages.control_mean
9.76186From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00151673
00151674
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable transcription corepressor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans sin-3. In C. elegans, sin-3 is involved in several processes, including cell fate specification; nematode male tail mating organ morphogenesis; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28517
Corresponding_transcriptCRE28517.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1110440
Microarray_resultsGPL14146_CRE28517_2714-2773_0.769_171_A
GPL14146_CRE28517_3930-3989_0.878_24_C
GPL14146_CRE28517_4044-4103_0.508_740_B
MethodGene