WormBase Tree Display for Gene: WBGene00059838

WBGene00059838 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 4
    Name: CGC_name: Cre-ears-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29859
      Molecular_name: CRE29859
        CRE29859.1
        RP11635
      Other_name: cr01.sctg16.wum.12
        Cre-ers-2 From_analysis: Inferred_from_orthology
      Public_name: Cre-ears-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-ers-2
        3 03 Jul 2008 11:45:26 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29859
                Other_name: cr01.sctg16.wum.12
        4 29 Jan 2010 10:38:19 WBPerson2970 Name_change: CGC_name: Cre-ears-1
                Other_name: Cre-ers-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ears
    RNASeq_FPKM: WBls:0000004 33.266 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        33.5598 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        33.8536 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.005 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        118.487 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        122.091 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        125.696 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        142.347 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        99.1338 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 18.365 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        51.4031 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        66.3106 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        69.5337 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 40.6461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        43.4585 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        43.6166 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        63.3877 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        65.3116 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        83.1589 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        89.0058 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        91.9835 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 53.3773 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        58.8863 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155296
      00155297
      00155298
      00155299
      00155300
      00155301
      00155302
      00155303
      00155304
    Ortholog (33)
    Paralog: WBGene00064554 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00071422 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00071425 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00074598 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00076704 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and glutamate-tRNA ligase activity. Predicted to be involved in glutamyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Is an ortholog of C. elegans ears-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29859
    Corresponding_transcript: CRE29859.1
    Other_sequence (82)
  Experimental_info: Expr_pattern: Expr1103251
    Microarray_results: GPL14146_CRE29859_2959-3018_0.925_1_A
      GPL14146_CRE29859_3172-3231_0.921_2_B
      GPL14146_CRE29859_3246-3305_0.918_3_C
  Method: Gene