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WormBase Tree Display for Gene: WBGene00059845

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Name Class

WBGene00059845SMapS_parentSequenceCrem_Contig9
IdentityVersion2
NameSequence_nameCRE29854
Molecular_nameCRE29854
CRE29854.1
RP39236
Other_namecr01.sctg16.wum.19
Public_nameCRE29854
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:26WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29854
Other_namecr01.sctg16.wum.19
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040.060038From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.102075From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.144112From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.875702From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
2.55574From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
2.82512From_analysisRNASeq.remanei.WBls:0000027.control_median
3.0945From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4.01471From_analysisRNASeq.remanei.WBls:0000027.control_mean
9.5329From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003814.78From_analysisRNASeq.remanei.WBls:0000038.control_mean
18.9185From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
20.9139From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
4.50748From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000411.85934From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
3.54692From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
3.8679From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.39044From_analysisRNASeq.remanei.WBls:0000041.control_mean
4.62561From_analysisRNASeq.remanei.WBls:0000041.control_median
5.38332From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
5.55301From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
6.13217From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010113.0211From_analysisRNASeq.remanei.total_over_all_stages.control_mean
7.83253From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00155315
00155316
00155317
Ortholog (30)
ParalogWBGene00056452Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00060959Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00071318Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00060957Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00060958Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00072274Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00064341Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00067028Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metallocarboxypeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans ZC434.9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29854
Corresponding_transcriptCRE29854.1
Other_sequence (33)
Experimental_infoExpr_patternExpr1103851
Microarray_resultsGPL14146_CRE29854_1012-1071_0.872_23_C
GPL14146_CRE29854_1238-1297_0.632_255_B
GPL14146_CRE29854_2222-2281_0.934_1_A
MethodGene