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WormBase Tree Display for Gene: WBGene00059878

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Name Class

WBGene00059878SMapS_parentSequenceCrem_Contig9
IdentityVersion4
NameSequence_nameCRE29609
Molecular_nameCRE29609
CRE29609.1
RP08705
Other_namecr01.sctg16.wum.52
Cre-tag-68
Public_nameCRE29609
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-tag-68
303 Jul 2008 11:45:26WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29609
Other_namecr01.sctg16.wum.52
403 Jul 2018 11:45:27WBPerson1983Name_changeCGC_nameRetired non-elegans tag gene names
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000041.14334From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
1.52207From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.9008From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002711.218From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4.01661From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.22096From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
7.96211From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.30692From_analysisRNASeq.remanei.WBls:0000027.control_median
9.39287From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.16204From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.11128From_analysisRNASeq.remanei.WBls:0000038.control_mean
6.68137From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
7.49044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000411.25594From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.25895From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.72932From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.19759From_analysisRNASeq.remanei.WBls:0000041.control_median
2.33961From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.66586From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
3.35486From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
3.77272From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001013.08417From_analysisRNASeq.remanei.total_over_all_stages.control_median
4.29741From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00155343
Ortholog (26)
ParalogWBGene00054654Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00055176Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00055580Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00060226Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064235Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084307Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in regulation of DNA-templated transcription and transforming growth factor beta receptor signaling pathway. Is an ortholog of C. elegans tag-68.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29609
Corresponding_transcriptCRE29609.1
Other_sequenceHG01978
Oden_isotig19148
JI172413.1
HGC02733_1
Experimental_infoExpr_patternExpr1116157
Microarray_resultsGPL14146_CRE29609_1043-1102_0.958_3_B
GPL14146_CRE29609_1092-1151_0.962_2_A
GPL14146_CRE29609_1176-1235_0.964_1_C
MethodGene