WormBase Tree Display for Gene: WBGene00059897

WBGene00059897 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 4
    Name: CGC_name: Cre-rtel-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29818
      Molecular_name: CRE29818
        CRE29818.1
        RP38371
      Other_name: cr01.sctg16.wum.71
        Cre-bch-1 From_analysis: Inferred_from_orthology
      Public_name: Cre-rtel-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-bch-1
        3 03 Jul 2008 11:45:26 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29818
                Other_name: cr01.sctg16.wum.71
        4 08 Aug 2008 11:28:02 WBPerson2970 Name_change: CGC_name: Cre-rtel-1
                Other_name: Cre-bch-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rtel
    RNASeq_FPKM: WBls:0000004 19.8792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        20.1912 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        20.5032 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.319741 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        4.53533 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        5.26348 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        6.01108 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        7.48683 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        8.71204 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.863368 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        5.2009 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        6.58593 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        8.15339 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 17.1239 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        18.4873 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        29.5597 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        33.6686 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        34.9006 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.7792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        4.32739 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.6882 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 6.27356 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        9.68039 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155365
      00155366
      00155367
      00155368
      00155369
      00155370
    Ortholog (39)
    Paralog: WBGene00055749 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00060907 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065373 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00086139 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable several functions, including ATP binding activity; DNA helicase activity; and hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides. Predicted to be involved in nucleobase-containing compound metabolic process. Is an ortholog of C. elegans rtel-1. In C. elegans, rtel-1 is involved in regulation of double-strand break repair via homologous recombination. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29818
    Corresponding_transcript: CRE29818.1
    Other_sequence: Dviv_isotig15643
      EX557373.1
      AI151708.1
      HBC13927_1
      OVC00313_1
      ACC26372_1
      Dviv_isotig15644
      EX910057.1
  Experimental_info: Expr_pattern: Expr1097223
    Microarray_results: GPL14146_CRE29818_542-601_0.870_17_C
      GPL14146_CRE29818_716-775_0.887_8_B
      GPL14146_CRE29818_781-840_0.882_12_A
  Method: Gene