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WormBase Tree Display for Gene: WBGene00059904

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Name Class

WBGene00059904SMapS_parentSequenceCrem_Contig9
IdentityVersion3
NameCGC_nameCre-pash-1From_analysisInferred_from_orthology
Sequence_nameCRE29813
Molecular_nameCRE29813
CRE29813.1
RP39638
Other_namecr01.sctg16.wum.78
Public_nameCre-pash-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:26WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29813
Other_namecr01.sctg16.wum.78
304 Jul 2008 11:06:40WBPerson4055Name_changeCGC_nameCre-pash-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpash
RNASeq_FPKMWBls:000000479.7324From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
80.824From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
81.9155From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002710.6221From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
2.02254From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.07684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.34852From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.37471From_analysisRNASeq.remanei.WBls:0000027.control_median
9.67259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000381.46285From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.5928From_analysisRNASeq.remanei.WBls:0000038.control_mean
7.65307From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
7.66248From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:000004133.2489From_analysisRNASeq.remanei.WBls:0000041.control_median
33.8199From_analysisRNASeq.remanei.WBls:0000041.control_mean
59.3566From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
61.2115From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
61.7281From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
6.67731From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
6.80465From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
7.14119From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010119.9121From_analysisRNASeq.remanei.total_over_all_stages.control_mean
9.57778From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00155371
00155372
00155373
00155374
00155375
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity; heme binding activity; and identical protein binding activity. Predicted to be involved in primary miRNA processing. Predicted to be part of microprocessor complex. Is an ortholog of C. elegans pash-1. In C. elegans, pash-1 is involved in primary miRNA processing and regulation of developmental process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29813
Corresponding_transcriptCRE29813.1
Other_sequenceCJC09477_1
CBC10852_1
CBC09698_1
Experimental_infoExpr_patternExpr1103436
Microarray_resultsGPL14146_CRE29813_1049-1108_0.781_149_A
GPL14146_CRE29813_1303-1362_0.863_54_C
GPL14146_CRE29813_550-609_0.823_91_B
MethodGene