WormBase Tree Display for Gene: WBGene00059915

WBGene00059915 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name: CGC_name: Cre-sdz-16.3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29597
      Molecular_name: CRE29597
        CRE29597.1
        RP19950
      Other_name: cr01.sctg16.wum.89
      Public_name: Cre-sdz-16.3
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:26 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29597
                Other_name: cr01.sctg16.wum.89
        3 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cre-sdz-16.3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sdz
    RNASeq_FPKM: WBls:0000004 4.03095 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        5.84451 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        7.65807 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 0.140473 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        0.176693 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        0.188333 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        0.218971 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        0.278278 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        0.358246 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        0.622221 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        0 From_analysis (46)
      WBls:0000027 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
            RNASeq.remanei.WBls:0000027.control_mean
            RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.103444 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        0.142795 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.32494 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 0.055642 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.079893 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.144601 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.147115 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.149629 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.158734 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.195846 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.326792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 0 From_analysis (12)
      WBls:0000101 0.502685 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog (23)
    Paralog: WBGene00060016 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00060017 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066609 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            GeneACeDB-Compara
      WBGene00071330 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            GeneACeDB-Compara
      WBGene00071328 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            GeneACeDB-Compara
      WBGene00069908 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            GeneACeDB-Compara
      WBGene00068529 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            GeneACeDB-Compara
      WBGene00069907 Caenorhabditis remanei From_analysis: Inparanoid_8
            GeneACeDB-Compara
      WBGene00079115 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is an ortholog of C. elegans C38D9.8; Y44A6C.2; and sdz-16. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29597
    Corresponding_transcript: CRE29597.1
  Method: Gene