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WormBase Tree Display for Gene: WBGene00060014

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Name Class

WBGene00060014SMapS_parentSequenceCrem_Contig9
IdentityVersion3
NameCGC_nameCre-prp-4From_analysisInferred_from_orthology
Sequence_nameCRE29751
Molecular_nameCRE29751
CRE29751.1
RP04509
Other_namecr01.sctg16.wum.184
Public_nameCre-prp-4
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-prp-4
303 Jul 2008 11:45:30WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29751
Other_namecr01.sctg16.wum.184
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classprp
RNASeq_FPKMWBls:000000440.1971From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
43.612From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
47.027From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002725.6666From_analysisRNASeq.remanei.WBls:0000027.control_mean
31.2528From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
31.9143From_analysisRNASeq.remanei.WBls:0000027.control_median
32.5758From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
33.1771From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.66088From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003819.1474From_analysisRNASeq.remanei.WBls:0000038.control_mean
23.0272From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
26.8443From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
7.57068From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004120.9662From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
20.9948From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
21.9737From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
38.9789From_analysisRNASeq.remanei.WBls:0000041.control_median
40.1071From_analysisRNASeq.remanei.WBls:0000041.control_mean
55.9841From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
59.5324From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
61.1916From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010130.9483From_analysisRNASeq.remanei.total_over_all_stages.control_median
31.4051From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (32)
Paralog (25)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD domain, G-beta repeat; PRP4-like superfamily; Pre-mRNA processing factor 4 (PRP4)-like; WD40-repeat-containing domain superfamily; G-protein beta WD-40 repeat; WD40/YVTN repeat-like-containing domain superfamily; WD40 repeat; and pre-mRNA processing factor 4 (PRP4) like. Is an ortholog of C. elegans prp-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29751
Corresponding_transcriptCRE29751.1
Other_sequence (75)
Experimental_infoExpr_patternExpr1112160
Microarray_resultsGPL14146_CRE29751_1212-1271_0.942_4_B
GPL14146_CRE29751_1299-1358_0.930_7_A
GPL14146_CRE29751_997-1056_0.926_9_C
MethodGene